Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00646 ATGACTTCAATCCTCCAACCTGGGTCCAATCTGGGCCGGCCCACTGAAAATTTCTTTCCGCCCAGCCCATGTTCCATCAACACACTCTCCTCTTGGTCTCTCTTTGCCCTACCAAGTTCCGAAAGCCACACTCACCTCTCACTCCAAACCACACCTTCCGAGTCCGAAGGCCACCGACCCACCACCGGAACCATGCTGCGCCTCCTAAAGCCGAAGCCTTTTCTCTCCGGGCACCACCTCATCCAGCGGTGCGCCGTGAGCGGCACCGCGAAGGGCAAGGCGAAGATCAAAGCCGGGCAAGCCCTAAAACGCTCCCGCATCACCACCAGAAAGCCCGGATCCGAACCGAAGCCCGGAGGCCCAACCGGGTCGCGCGAGAGGCAAGAGCGCGAGCACCTCTACGAGCAGTGCCTCCAAGCCCCCACCCCTCTCCGCCACCTCACCCCAAAGCAGCGAGAGCGCGAAGCGGAGCGCGAGAAGTTGGGCCTCATCAGCAAAGACAGACAACGAGAAATCGACATGATGAGGAAAAAGAACCAGAAGTTTAAGGTTTCGGAGAAACCCACGATTATTGGGACTCCTGGTTTGGACTACGTGAGTTTGGGGTTGGTGGATGTTGAGAAGTTGCCCAAGTATGAGTTGAATGTTGAGGATGGGAGAAGGTTGGCGAAGGAGTATAGTAGGGTTCTGATGAGGAAGCATAGGGCGAGACAGGCTGCGGAATCCACGCTTTTGAGGATGAAAAAGGAGGCAATTGATGCTTTGCCTGAGGGTTTGAGAGAGGCTGCTTTGGTTCCTGATTTGAGTCCTTTTCCTGTTAATCGCTTTATGGCTACTCTTACTCCTCCCATTGAGGGTTACATTGAGCAGgatgtctacacagatgattcatgggcaaggtgggattatgcgttgcataaacctagagagaaaacaaaagataaaattgtgaatgcaaagaaaggatatgtgactgatgttttggaacacatgtatcatgggaccagtgaagaacatagggattccttcgattttaccatgatgcatgagaggatcgaccactgcttgcagttgcgagacgaggtcgacgaaaaggaaaggggctaa 1107 0.4345 MTSILQPGSNLGRPTENFFPPSPCSINTLSSWSLFALPSSESHTHLSLQTTPSESEGHRPTTGTMLRLLKPKPFLSGHHLIQRCAVSGTAKGKAKIKAGQALKRSRITTRKPGSEPKPGGPTGSRERQEREHLYEQCLQAPTPLRHLTPKQREREAEREKLGLISKDRQREIDMMRKKNQKFKVSEKPTIIGTPGLDYVSLGLVDVEKLPKYELNVEDGRRLAKEYSRVLMRKHRARQAAESTLLRMKKEAIDALPEGLREAALVPDLSPFPVNRFMATLTPPIEGYIEQDVYTDDSWARWDYALHKPREKTKDKIVNAKKGYVTDVLEHMYHGTSEEHRDSFDFTMMHERIDHCLQLRDEVDEKERG 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00646 368 PANTHER 39S RIBOSOMAL PROTEIN L40, MITOCHONDRIAL 75 291 IPR039145 GO:0005762
Cca11g00646 368 MobiDBLite consensus disorder prediction 88 130 - -
Cca11g00646 368 MobiDBLite consensus disorder prediction 45 60 - -
Cca11g00646 368 MobiDBLite consensus disorder prediction 45 64 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00646 - - gmx:100776061 408.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00646 11 10530236 10535246 Cca11g00646 11 10530236 10535246 ECH