Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00645 ATGGCAGCGGCGGCAGTGACGGTGCTACTCCCACCTAGGATTCCGACCACCACCACCACCAACGTTACACGCTGCTCTGCTTTGCCTTCTCTCCCTCCCCGTGTCTCCAACACCACCACCACTTTGTTCTCACCTTCCCTCAACCACTTTTCAGTGTCCCGGAAATCTTCTCTGCTTCAGACCAGAGCTTCTTCAGAGGAATCATCCCCAGTAGATGCCAATGAGTTGTTCACAGATTTGAAGGAAAAGTGGGATGCTGTTGAAAACAAGTCCACAGTACTTCTTTATGGTGGTGGGGCTCTAGTTGCTGTTTGGCTATCTTCAATTCTTGTGAGCGCCATCAACTCAGTTCCCTTGCTTCCAAAGATTATGGAGTTGGTAGGGCTAGGGTACACTGGATGGTTTGTCTACCGATACCTTCTGTTTAAGTCTAGCAGGAAGGAGCTAGCTACAGACATTGATGCACTGAAGAAGAAAATTGCTGGAACTGAATAG 495 0.4889 MAAAAVTVLLPPRIPTTTTTNVTRCSALPSLPPRVSNTTTTLFSPSLNHFSVSRKSSLLQTRASSEESSPVDANELFTDLKEKWDAVENKSTVLLYGGGALVAVWLSSILVSAINSVPLLPKIMELVGLGYTGWFVYRYLLFKSSRKELATDIDALKKKIAGTE 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00645 164 PANTHER MEMBRANE PHOSPHOPROTEIN 14 KDA, CHLOROPLAST, PUTATIVE-RELATED 4 164 - -
Cca11g00645 164 PANTHER - 4 164 IPR033344 GO:0009579
Cca11g00645 164 Coils Coil 146 164 - -
Cca11g00645 164 Pfam CAAD domains of cyanobacterial aminoacyl-tRNA synthetase 79 162 IPR025564 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00645 Cca-Chr11 10526342 10529176 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00645 - - gmx:100305578 275.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00645 11 10526342 10529176 Cca11g00645 11 10526342 10529176 ECH