Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00644 ATGGTGGCATGTTACATTGGCATGCAAGTTTCAGTTGTTAGATTGCGCAGTTTCTCTCTATGGTTAAGAGGAATGAATTTTAGTTTCTTCAATCTTCCACCACGGATTGTGTCACAGCCTAATGAGAAGAGAATAGTTATTTTATTTGAAAACTTGGGGCATTGGTCTTCTCATTATTACAATGTGTCTAACTACACAATGGTGGCTCCAGTTTTTGGTCTTATGGCCTACAGTTCCTCAGAATCAGCATTCATTAATCAGAATATTGACTTTACCATCCGTGGTGACCCCATCAGAATTCGTTTTCCTCTTGCTGAGCAACATGGGAAAAATAACACACCAATTTGTGCCAAGTTTAGTGTTGATGGATTGGTGAAATTCATAAACATGAGTAAGCCATATGTCTGTGAAGCACGTAGCCAAGGGCACTACACTCTTGTAGTTCCATCTTCTCCAAAAGAACCTCACACACGAAGCAAGAGATTTACTATATGGTGGGTGTTAGGATTTGTAATAGGTTTTGTTGGGTTGGTTATTTTGGTTTTGATATTGCTAGCTTTGGTTAAGGAGGCCAAGAGGAGAAGAATAAGAAAATTGGAGAGAATATCATCAGGAGGTGAGCTTTTTGATACATTTTGGATTGGAGAAACTAAATTGCCTTTAGCTTCATCGATTAGAACCCAACCAATCCTTGAGAATGAAGATGCCATTCGTTAA 717 0.3877 MVACYIGMQVSVVRLRSFSLWLRGMNFSFFNLPPRIVSQPNEKRIVILFENLGHWSSHYYNVSNYTMVAPVFGLMAYSSSESAFINQNIDFTIRGDPIRIRFPLAEQHGKNNTPICAKFSVDGLVKFINMSKPYVCEARSQGHYTLVVPSSPKEPHTRSKRFTIWWVLGFVIGFVGLVILVLILLALVKEAKRRRIRKLERISSGGELFDTFWIGETKLPLASSIRTQPILENEDAIR 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00644 238 Pfam Protein of unknown function (DUF1191) 7 149 IPR010605 -
Cca11g00644 238 PANTHER PROTEIN, PUTATIVE (DUF1191)-RELATED 4 235 IPR010605 -
Cca11g00644 238 PANTHER PLANT/F17O14-7 PROTEIN 4 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00644 Cca-Chr11 10522814 10524125 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00644 - - gmx:102669881 333.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00644 11 10522814 10524125 Cca11g00644 11 10522814 10524125 ECH