Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00635 ATGGAGGTTGGATTCTTGGGTTTGGGTATAATGGGCAAGGCCATGTCAATCAATCTTCTACGCCATGGTTTCAAAGTCACTGTGTGGAACAGAACCCTCTCCAAGTGTAATGAACTCGTGGAACATGGTGCTTCAGTTGGAGAAACCCCAGCAGCTGTAGTCAAGAAATGCAAGTATACAATTGCAATGTTATCTGATCCTTCTGCTGCATTATCGGTTGTATTTGATAAAGATGGTGTTCTTGATCATATTAATGGGAAATGCTATATTGACATGTCCACAGTTGATGCTGATACATCTTCCAAGATATCCGAGGCAATCAAAGCAAAAGGTGGTTATTTCCTTGAAGCTCCTGTTTCGGGTAGCAAGAAGCCTGCAGAAGATGGCCAACTAATAATACTCGTTGCTGGGGACAAGGCATTGTATGATGAAGTACTCCCAGCATTTGATGTACTGGGGAAGAAGTCTTTCTTTCTGGGTGAGGTTGGAAATGGTGCAAAAATGAAGCTTGTTGTTAACATGATAATGGGAAGTATGATGAATGCTTTCTCCGAGGGACTCACACTAGCTGAAAGAAGTGGTTTGAGCCCTGGAACTCTTCTTGATGTGCTGGATCTCGGTGCCATGAGTAATGGCATGTTTAAATTGAAAGGACCTACAATGCTCAAAAACAGTTATCCCCCAGCTTTTCCACTGAAACACCAGCAGAAGGACATGAGATTAGCACTTGCCCTTGGAGATGAAAATGCTGTATCAATGCCCGTAGCAGCTGCAGCAAACGAGGCTTTCAAGAAAGCCAGAAGCATGGGGTTGGGAGACCTTGATTTTTCAGCAGTTCACGAGACTTTGAAAGCTCCTGATCATTCATCTTGA 873 0.4353 MEVGFLGLGIMGKAMSINLLRHGFKVTVWNRTLSKCNELVEHGASVGETPAAVVKKCKYTIAMLSDPSAALSVVFDKDGVLDHINGKCYIDMSTVDADTSSKISEAIKAKGGYFLEAPVSGSKKPAEDGQLIILVAGDKALYDEVLPAFDVLGKKSFFLGEVGNGAKMKLVVNMIMGSMMNAFSEGLTLAERSGLSPGTLLDVLDLGAMSNGMFKLKGPTMLKNSYPPAFPLKHQQKDMRLALALGDENAVSMPVAAAANEAFKKARSMGLGDLDFSAVHETLKAPDHSS 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00635 290 PIRSF HIBADH 1 290 IPR015815 GO:0016491
Cca11g00635 290 Pfam NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 163 281 IPR029154 GO:0051287
Cca11g00635 290 Gene3D - 1 162 - -
Cca11g00635 290 ProSitePatterns 3-hydroxyisobutyrate dehydrogenase signature. 5 18 IPR002204 GO:0016491
Cca11g00635 290 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 161 284 IPR008927 -
Cca11g00635 290 PANTHER OXIDOREDUCTASE GLYR1-RELATED 2 283 - -
Cca11g00635 290 Gene3D - 163 288 IPR013328 GO:0016491
Cca11g00635 290 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 161 IPR036291 -
Cca11g00635 290 Pfam NAD binding domain of 6-phosphogluconate dehydrogenase 3 157 IPR006115 GO:0050661
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00635 Cca-Chr11 10386321 10392197 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00635 K18121 - gmx:100817216 542.732