Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00633 ATGTTTTTGAGTTTACCGTCACCATCACCACTGTTTTCCAACATGTCAAAGCAAAAGGAGAACACGGAAAGGAGCGTGAGCAAAGCCAAAAGGGCACATCCATTGGCGGAAGCAGTGGAAGACATCGAAGACGCACTATCCTTCTCCAAAGACGAGACTCGCAAACTGAGAGTGTCTCTTTTGGATTGGTACGATCTCAACCGCAGGGAACTACCTTGGAGAACACAACACCTTgaacaagaaaaggaagaagaagttgaaagaagaGCTTATGGGGTGTGGGTTTCCGAGGTTATGCTTCAGCAAACAAGGGTTCAGACTGTTATTGCCTATTACAACCGTTGGATGCAAAAATGGCCCACCATTCACCATCTTGCACAAGCTTCTCTTGAGGAAGTAAATGAGATGTGGGCAGGTTTGGGCTACTACCGAAGAGCTCGTTTTCTTCTAGAGGGGGCAAAGAAAATAGCTGCAGAAGGAGGCAAAATTCCTAATGTGGCTTCTATGCTACGAAAGATTCCTGGAATTGGAGACTACACATCTGGAGCAATTGCTTCTATTGCATTCAAAGAGGTTGTACCTGTTGTTGATGGAAATGTTGTAAGGGTGATTGCTAGACTGAGGGCTGTTTCTGCAAATCCAAAAGACTCGGTAACCGTTAAGAGGTTTTGGAAATTAGCTGCTCAGTTGGTTGATCCTGTTCGTCCTGGGGACTTCAATCAGGCTCTCATGGAACTTGGGGCAACTGTATGCACCCCTTTGAACCCGAGCTGTTCCTCTTGTCCAGCGTCAGAATTTTGTCAAGCACTATCAATGGCTAAAAATGATAGTACTGTAGCAGTTACAGATTATCCTGTTAAGGGTGTGAAGGTTAAACAAAGAAGTGATTTTTCCGCTGTATGTGTGGTTGAATTAATTGGAACTGAAAGATTGTTGGATAAAATCCAGTCTAGCAGCAAATTTATTCTTGTCAAAAGACCTGAAGAAGGATTGCTTGCTGGTCTCTGGGAGTTTCCATCTGTCTCACTTGATGGAGAAACAGTTCCAACAGCTAGAAGAGAAGCAATGGATTGCTTCTTGAAAAAGAATCTCAAAATTGACATCAGAAAGACTTGCAATATAGTTTTGAGGGAAGATATTGGGGATTTTGTTCATATTTTCAGCCACATTCGCCTCAAGTTGTATGTTGAATTGCTGGTGTTACAATTGAAAGAAGGAGGAGTAGATGATTTGATCAAAAGCCCGGACAATAAAACTACAACTTGGAAGTGTGTTTACAGTAATGCGCTTTCTAGTATGGGACTGACGAGCAGTGTAAGAAAGGTGTACAACATGGTTGAAAACTTTAAGCAGAAAAGTCTTCCTTTTAACCACTTTCCAACCAAAAAGAGAACTAGAACGACGAAGAGAAACTAG 1416 0.4153 MFLSLPSPSPLFSNMSKQKENTERSVSKAKRAHPLAEAVEDIEDALSFSKDETRKLRVSLLDWYDLNRRELPWRTQHLEQEKEEEVERRAYGVWVSEVMLQQTRVQTVIAYYNRWMQKWPTIHHLAQASLEEVNEMWAGLGYYRRARFLLEGAKKIAAEGGKIPNVASMLRKIPGIGDYTSGAIASIAFKEVVPVVDGNVVRVIARLRAVSANPKDSVTVKRFWKLAAQLVDPVRPGDFNQALMELGATVCTPLNPSCSSCPASEFCQALSMAKNDSTVAVTDYPVKGVKVKQRSDFSAVCVVELIGTERLLDKIQSSSKFILVKRPEEGLLAGLWEFPSVSLDGETVPTARREAMDCFLKKNLKIDIRKTCNIVLREDIGDFVHIFSHIRLKLYVELLVLQLKEGGVDDLIKSPDNKTTTWKCVYSNALSSMGLTSSVRKVYNMVENFKQKSLPFNHFPTKKRTRTTKRN 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00633 471 Gene3D - 55 269 IPR023170 -
Cca11g00633 471 CDD DNA_Glycosylase_C 315 446 IPR029119 -
Cca11g00633 471 PANTHER ADENINE DNA GLYCOSYLASE 25 464 IPR044298 GO:0006284|GO:0016798
Cca11g00633 471 MobiDBLite consensus disorder prediction 1 20 - -
Cca11g00633 471 Pfam NUDIX domain 318 442 IPR029119 -
Cca11g00633 471 Gene3D Hypothetical protein; domain 2 70 194 - -
Cca11g00633 471 MobiDBLite consensus disorder prediction 1 33 - -
Cca11g00633 471 SMART ccc3 250 270 IPR003651 GO:0051539
Cca11g00633 471 SMART endo3end 99 249 IPR003265 GO:0006284
Cca11g00633 471 CDD ENDO3c 91 247 IPR003265 GO:0006284
Cca11g00633 471 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 290 453 - -
Cca11g00633 471 SUPERFAMILY Nudix 317 445 IPR015797 -
Cca11g00633 471 Pfam HhH-GPD superfamily base excision DNA repair protein 95 227 IPR003265 GO:0006284
Cca11g00633 471 SUPERFAMILY DNA-glycosylase 55 270 IPR011257 GO:0003824|GO:0006281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00633 K03575 - gmx:100818278 752.281