Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00625 ATGAAGGCATCTCTAAGACTTCTCTTCATAATTACTTTCGTTGGTTCAATCTTCCTTGCAAGCCCAGAAGCCGACTCGTGTGCCAGCAATCTTAGCCTCAATGTTCCTATCCTTTTTGACACAACCAACCTTCAATGCCTTTCTGTATGGGATGCTCAAAGTTTCATACTCAGATATGTTCAGACTTCTGCAAACATTTGGAGCTTCGTTCTCTCAACCCCAGACACAAATTCTTACATAGCTATGGGGTTCTCGGTCAGCGGTGGCATGGTGGGTTCAAGTGCCATGGTGGGGTGGGTAGCATCAAGAGGAGCCAGTGGAGGGATAAAGCAGTATTATCTTGGTGGCGTCACACCAAATCAGGTGGTTCCTGATAAAGGCAACCTACAGGTTATAGCCAATTCATCCTTCATCACTTTACAGTCCTCTCGTCTGTTCATGGTGTTTCAGTTAGAAACTACCGGACCTTTGTCCTGGCTGATATTTGCCACTGGATCCACCGGTTTATTCCCTGCAGCACCAAGTTTTGCACTAACAAAACACCTGGACAAGTTCTCCACAAGAATAGACTACTCAAAAGCCAACATTGGAAGTTCACAAGGGGTTGGAAATTCTTCATCACAAGTAGATGGAATTGGTTCACAAGCAGACTCTTGTAGCTCCAACCTAAACCTCAGTGTTCCTCTCCTCTTCGACACAACCAAGCTCAATTGTCTTCCTGTTTGGAATGCTCAAGGATACATCCTTAGATATTCACAGACTTCTCCAAACATATGGAGCTTCATTCTCTCAGCACCAAATCCAAATTCATACATAGCAATGGGGTTCTCTCCCAATGGAGCCATGATTGGTTCAAGTGCCATTGTGGGGTGGATCTCAACCAGTGGTGCTGGTGGAGGCATGAAGCAGTATTATCTAACAGGACTTGCACCAAGCCAGGTGGTGCCAGACAGAGGCAACTTAAAAGTTCTCATCAACTCAACCTTCATTACATCACAGTCCTCACGTTTGTACATGGCCTTTCAGTTACAAACCAACCAACCACTGTCCCGGATCCTATATGCCTTTGGACCTAACGGTATCTTCCCTTCGGCACCAAGTTTTGCATTAACACAGCACCAAGACAAAGTCTCCACTACGTTGAATTACGCAACAGGTTCAAGTGCATCAAACTCATATATGAACCTGAAAAGAAGCCACGGAGTGTTGAATATCTTGGGATGGGGTGTCCTAATCGTAATGGGAGCAATAGTTGCTCGCTACTTCAAGGAATGGGATCCATTTTGGTTTTATTTCCATGCTTCAGTTCAATTCTTGGGTTTTGTTCTGGGAGTAATTGGTGTAATTAGTGGTCTTGTCTTGAATAATCAACTCCATATAGACGTTAGTCTTCACAAGGCTCTTGGAATCATCATTCTCGTTCTAGGTTGCCTCCAGATAATGGCTATTCTTGGTCGACCGAAGAAGGAATCAAAAGTGAGAAAGTATTGGAATTTATACCATCATAACATGGGGAGGATTTTGATTATACTAGCCGTAGCTAACATTTTCTACGGAATCCAATTAGGTAAGGAGGGAAGTGGATGGAATATTGGTTATGGAATTGTGCTTGCTATATTACTCACTATGGCAATTACTTTTGAGGCACAATTGTGTAGTAGAGACTAA 1668 0.4347 MKASLRLLFIITFVGSIFLASPEADSCASNLSLNVPILFDTTNLQCLSVWDAQSFILRYVQTSANIWSFVLSTPDTNSYIAMGFSVSGGMVGSSAMVGWVASRGASGGIKQYYLGGVTPNQVVPDKGNLQVIANSSFITLQSSRLFMVFQLETTGPLSWLIFATGSTGLFPAAPSFALTKHLDKFSTRIDYSKANIGSSQGVGNSSSQVDGIGSQADSCSSNLNLSVPLLFDTTKLNCLPVWNAQGYILRYSQTSPNIWSFILSAPNPNSYIAMGFSPNGAMIGSSAIVGWISTSGAGGGMKQYYLTGLAPSQVVPDRGNLKVLINSTFITSQSSRLYMAFQLQTNQPLSRILYAFGPNGIFPSAPSFALTQHQDKVSTTLNYATGSSASNSYMNLKRSHGVLNILGWGVLIVMGAIVARYFKEWDPFWFYFHASVQFLGFVLGVIGVISGLVLNNQLHIDVSLHKALGIIILVLGCLQIMAILGRPKKESKVRKYWNLYHHNMGRILIILAVANIFYGIQLGKEGSGWNIGYGIVLAILLTMAITFEAQLCSRD 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00625 555 ProSiteProfiles DOMON domain profile. 245 357 IPR005018 -
Cca11g00625 555 Gene3D - 376 551 - -
Cca11g00625 555 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 9 195 - -
Cca11g00625 555 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 209 554 - -
Cca11g00625 555 ProSiteProfiles DOMON domain profile. 53 165 IPR005018 -
Cca11g00625 555 PANTHER BNAC01G39800D PROTEIN 209 554 - -
Cca11g00625 555 PANTHER BNAC01G39800D PROTEIN 9 195 - -
Cca11g00625 555 ProSiteProfiles Cytochrome b561 domain profile. 364 555 IPR006593 -
Cca11g00625 555 SMART 561_7 399 520 IPR006593 -
Cca11g00625 555 Pfam Eukaryotic cytochrome b561 400 520 IPR006593 -
Cca11g00625 555 CDD DOMON_DOH 53 186 IPR045266 -
Cca11g00625 555 SMART DOMON_3 79 165 IPR005018 -
Cca11g00625 555 SMART DOMON_3 271 357 IPR005018 -
Cca11g00625 555 CDD Cyt_b561_FRRS1_like 378 549 - -
Cca11g00625 555 CDD DOMON_DOH 245 378 IPR045266 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00625 Cca-Chr11 10192626 10199948 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00625 - - gmx:100804791 940.258