Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00624 ATGAAGCTCACACACTTTTGCCAATGCCAAATACTCTTGTTCATTATCCTTTATAGTTCATCAACCTTTGTGACTTCTCAAGATTCATGCTCCTCCAAATTGGTGCAAATTCAGCTTCCTTACCCTTTCGATACAAGTGCACTTCTATGCAGCCCAGTGTGGCCTACTCACAATTTCATCCTTAGATATGCTAAGGCTTCATCAGATGTGTGGAGCTTCATATTCTCATTCCCTTTGGACTTAAAGGCTTATGCGGCTATAGGGTTCTCGAAAGATGGTAGCATGGTGGGTTCTAGTGCAATAGTGGGGTGGATGCCATCTCCAGGTACTGGGGGTATGCAATTGTACTATCTGGCTGGAAAATCACCAAATGAAGTGATTCGTAACAAAGGTGACATTTATGTTATGAATGCATCCTTTGTCCCAGCAACTGATTCGCTTGGCTACCTCATCTTCCAGTTGAAAACCACCCAACCTTCTTCAAATCTCTTGTTTGCCATTGGTCCCAATGGCCAATTTCCTAATTATCCAGATTACGCCTTGGCCCAACATGTCGATCAGACATCCATCACCATAGATTATAATAAAGGTGCTACCGGTGAAAATTCTAACCTAAATCTTCGAAGAAGTCATGGGGTTCTGAACATTATGGGATGGAGCATTCTAATGATAATAGGATCCATGATTGCTCGCTACTCCAAGCAATGGGATCCCATGTGGTTCTATTTCCATGCTTCCATTCAAACATTTGGCTTTGTGGCTGGCATAATTGGAATTTTATGTGGATTGCTCTTATCTAAGAAACTCGATTCTAAAGTCACTCATCACAGAAATATAGCGATCGTCATCATTCTCCTTGGATTCCTCCAGGTATTAGCCATTGTATTACGACCAGGGAAGGAATCGAAGATACGAAAGTATTGGAATTGGTATCACCATAACGTGGGGAGGATTTTGATTATCTTTGGAGTGCTTAACACCTTTTATGGACTCCATTTAGGAGGAGAAGGATCTAAGTCGTTTATTACTTATGGAGTCACTATTGCCGTTTTATTCATTATCACTGTCGTTTTGGAGATAAGAATGTGGATTATTGCAAGAAAAGAGACTCGGTCCAAAGATACATCATCATTCACCAATCCCTGGAGTTAG 1152 0.4115 MKLTHFCQCQILLFIILYSSSTFVTSQDSCSSKLVQIQLPYPFDTSALLCSPVWPTHNFILRYAKASSDVWSFIFSFPLDLKAYAAIGFSKDGSMVGSSAIVGWMPSPGTGGMQLYYLAGKSPNEVIRNKGDIYVMNASFVPATDSLGYLIFQLKTTQPSSNLLFAIGPNGQFPNYPDYALAQHVDQTSITIDYNKGATGENSNLNLRRSHGVLNIMGWSILMIIGSMIARYSKQWDPMWFYFHASIQTFGFVAGIIGILCGLLLSKKLDSKVTHHRNIAIVIILLGFLQVLAIVLRPGKESKIRKYWNWYHHNVGRILIIFGVLNTFYGLHLGGEGSKSFITYGVTIAVLFIITVVLEIRMWIIARKETRSKDTSSFTNPWS 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00624 383 CDD Cyt_b561_FRRS1_like 198 360 - -
Cca11g00624 383 Gene3D - 182 376 - -
Cca11g00624 383 CDD DOMON_DOH 58 189 IPR045266 -
Cca11g00624 383 SMART 561_7 210 331 IPR006593 -
Cca11g00624 383 ProSiteProfiles DOMON domain profile. 57 168 IPR005018 -
Cca11g00624 383 SMART DOMON_3 84 168 IPR005018 -
Cca11g00624 383 ProSiteProfiles Cytochrome b561 domain profile. 175 367 IPR006593 -
Cca11g00624 383 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 10 364 - -
Cca11g00624 383 PANTHER BNAC01G39800D PROTEIN 10 364 - -
Cca11g00624 383 Pfam DOMON domain 77 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00624 Cca-Chr11 10187199 10191091 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00624 - - aprc:113851090 548.895