Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00618 ATGGATCCTGAAGGAAAAAAGTTTGGAGGAGGACCAAGGGAATTGACAAGTGCTGTGGATCTAATAAGTCATTTCAAATTAATACCCCACTATGAGTTTTTCTGCAAGAGGTCACTCCCTGTGTCAATTGCGGACACACACTACCTTCACAATGTTGTAGGAGACACAGAAATAAGAAAAGGAGATGGGATGCAATTGGATCAACTTATTCAGAATACATCTTCCTACAGAGATACTAATGCTCGCATACAGCCTTTTGATCTAGATGTCCTCAAGGAAACCTTTCAACTCAGGGAAACGGCTCCCATTGATTTGCCTGCTGCAGAGAAAGGGATTCCAACTATTGCAGGAAAATCAAAAGGTGAGAATAAAGAGAAGGAGAAGAAGCATAAGAAGCACAAAGACAAGGACAAGGAGCATAAGAAGCACAAGCATCGTCATAAGGACCGTAGCAAAGACAAGGACAAGGACAAAAAGAAAGATAAAAGTGGGCATCGTGATTCCGGTGCTGATCACTCGAAGAAACACCATGAAAAGAAAAGGAAGCATGATGGAGATGATGATGTTAATCATGTGCACAAACACAAAAAGAGTAAGCATAAGAGCTCAAAAATTGATCAATTGGGGGCAATTAAGGAAAGGGATGCAGTCTATTGGCGCACTGGATATCTCAACATGTATGCATTGTTTTGA 693 0.4098 MDPEGKKFGGGPRELTSAVDLISHFKLIPHYEFFCKRSLPVSIADTHYLHNVVGDTEIRKGDGMQLDQLIQNTSSYRDTNARIQPFDLDVLKETFQLRETAPIDLPAAEKGIPTIAGKSKGENKEKEKKHKKHKDKDKEHKKHKHRHKDRSKDKDKDKKKDKSGHRDSGADHSKKHHEKKRKHDGDDDVNHVHKHKKSKHKSSKIDQLGAIKERDAVYWRTGYLNMYALF 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00618 230 MobiDBLite consensus disorder prediction 125 153 - -
Cca11g00618 230 PANTHER LUNG CANCER METASTASIS-RELATED LCMR1 PROTEIN 1 212 IPR019403 GO:0003712|GO:0006357|GO:0016592
Cca11g00618 230 MobiDBLite consensus disorder prediction 106 207 - -
Cca11g00618 230 MobiDBLite consensus disorder prediction 154 193 - -
Cca11g00618 230 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 19A-LIKE ISOFORM X1 1 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00618 Cca-Chr11 10116816 10119287 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00618 - - gmx:100814559 261.922