Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00609 ATGGAGGACTCAGCCATGTTGCGTCTGGTGAGGTGCCCCAAGTGTCAAAATGTCCTTCCTGAACTTGCCAATTACACTGTTTATCAATGTGGTGGTTGTGATACTGTTCTTCGAGGAAAGCTTAAAGGTTCCGAAGGTGGTAGGTTGTGGGAGGCTACGGATGAGGGACAAGGTGGAGGAGCACATGGTAAACCAGTAAGTTTCTTGGGGAAAGGGGTAGTTGATCTGGGTGATAATTCAGATGTTGATGTTAGGTCCAATGGTGGTTTCTCCAAGCAGGATCAAAGAAGGGATTTGGGGAAACCAAATAAAGGAAATGAGAGGTTTTTGGATGATTCCAAAGATGGGGATGAGAAAGGGATTTTGGAGAATGGTTTTGATGTCAATAAGGACAAAAGGGGTAAATCAATAGGAAGGGAGCATCATGAGCAGAAGCCTCAAATGGGACGGGACCAATTCTATGGGAGAATGTCTAATTGGCCAAATGGGGAGAGAGGTGAGATGGAGGGGTTTTGGAGAAAGCCACAAGCTGATATAGAGGGTGTTAGATTTCCCACTTTGAATTATCCTGAAGAGGGATCTTCAAATAGCTATTCAAGTTTTCCTTATGGGGAACAATGGAGGAATTGTAAGGACATGGATGGTATGAATAGGGTTCAGCACCTTGAGCAAGACCGAGCTGAGATATTAAGGAAGCTGGATGAGTTATCAAACCAGCTGAGCAAGTCTTCTGAGTTGGCTAATAATCCAAAAGAAAAGGTTCTTCCTGAGGGTAAGATGGTTCCTCCAGATCCTTATAATGGCCATGAAACTTGGCTTCCAGATGGATCATCTACGGTGAACAGGACCTCGAGACAATTCTTTGGCCCTGATAAACGCTTGGCAGGCCCCCCTTATTTCAATTATCATCATGATCCATATGCTTATTCAAGTGGTCATGAAATGGCCATGCCCAACTTCCACCCTTCCATGCACAATCCAAACTATGTTCCTGGATATGGGGATCCTTTTGTACCTCAAATGATGAAAGGTTCACACCCTTTACCTCATCAATTCCCTCAAAAACCAATGCATCCTTACTTTCCCGGGCACTATGTTGATACTGGTCCTGAATCATATGATCCATATGCACTTAATGCTATGCTTCACCCACCTTCTTGCTCTTGTTTTCGTTGCTATGACAACAAAAGAAGAGGTTCTGTGCCTGCACCACCTGCTGCATTCATTAACAGCAGATTCCCTCATACCCCTGCCCCAAATGATCCTATGTTGTACCGTCATGATATCCCAGGAGCAGTTGGTCCGCATGTTCATAATTCTAGAACTGCCATTCCTGATGTGAGTTTGCATGAAAATAAAATGCATACAAGATGGCATAGAGACTACAAGTCTGAGATGAATGGTTTTGTTCGAAGCCATCCTCGAAAAGTAGTGCCTGCTAATGGTAGTAGGCATTGCCTTCCTATAGCTGGTGGTTCTCCTTTCTTCACATGTCATAATTGCTTTGAGTTGCTGCAACTGCCTAAAAAGACACTGGTCATGGAGAAAAATCATAAGCAAAAAATGCGATGTGGGGTTTGTTCTTCAGAAATAAAATTTTCTGTCATCAATAAGAAGCTAGTTATTTGTCTTCATTCAGAAACGGAGGATAGTGCCACTTCCACGAGGATTGATGATACTGCTAATGAGGTTGTGAATAGTCATTTGTCCCATTCCCGTGGTGATGCTAACACCAGTGCTGTGAACTTCTCATCTGATGATTATTCTGGTTATGATTTTCACTCAGTTGATAGAGAATCTCCTGTGCTGGCTGGTGAACCAAGCTTGAACTCTAGCAAGTCTAGGGAGATGCAAAGTTTTCATTCTTCATCATCTCCCAGTACCTCTGATGATGAAAATAGTCCAGAAGTTATGAATGCACCAAGTGAAGCTACTAATAAGTCCATTCATCAGCCATCTAAATCCTCTGATCAATCTCCTCCACCTTCTGGCTCGTGCAATAACAATGCTGTAAGTCGATTAGGGAAAGGTAATCAAAGTAATCGCTCAGATCAAGGGAAGGAAAATATTGAAAAGAATGCCTCAAGGAAAAATTCATTGAAAGAGGTAGTGCTTGCATCTGAGATGGATGTCCATGATTATTCTAACACTGGGGTCTCCCAGGATTCTGGTGATGCAAGTGGAGAACACGATCATCCAAGGTCTAACAAAAGGGGTGAATCATTTTTAGCAAACATTATCAAGAGAGATAGCAGCAAAAGTAATGTTACTGTAAATGGACAACCCATACCAGATCGTGTGATTAAAAAGGCTGAAAAGCTAGCTGGACCAATCCAACCAGGAAATTACTGGTATGATTTCCGGGCTGGATTTTGGGGTGTCATGGATGGGCCATGTCTTGGAATAATTATGCCATTCATAGAAGAGTTCCAGCATCCCATGCCAGATAAATGTGCTGGTGGAAATACTGGTGTTTTTGTAAATGGCAGGGAACTTCACCAAAAAGACTTAGATTTGCTTTCTCGTAGAGGACTTCCTCGTGACAGCAATAGATCTTATATCATCGAAATTTCTGGGAGAATCCTGGATGAAGACACAGGAGAAGAGCTAGACAGCCTTGGGAAACTTGCACCAACAGTGGAGAAAGAAAGGCGTGGATTTGGCATGAAAGTACCAAGAGCAGCTGCATAA 2691 0.4288 MEDSAMLRLVRCPKCQNVLPELANYTVYQCGGCDTVLRGKLKGSEGGRLWEATDEGQGGGAHGKPVSFLGKGVVDLGDNSDVDVRSNGGFSKQDQRRDLGKPNKGNERFLDDSKDGDEKGILENGFDVNKDKRGKSIGREHHEQKPQMGRDQFYGRMSNWPNGERGEMEGFWRKPQADIEGVRFPTLNYPEEGSSNSYSSFPYGEQWRNCKDMDGMNRVQHLEQDRAEILRKLDELSNQLSKSSELANNPKEKVLPEGKMVPPDPYNGHETWLPDGSSTVNRTSRQFFGPDKRLAGPPYFNYHHDPYAYSSGHEMAMPNFHPSMHNPNYVPGYGDPFVPQMMKGSHPLPHQFPQKPMHPYFPGHYVDTGPESYDPYALNAMLHPPSCSCFRCYDNKRRGSVPAPPAAFINSRFPHTPAPNDPMLYRHDIPGAVGPHVHNSRTAIPDVSLHENKMHTRWHRDYKSEMNGFVRSHPRKVVPANGSRHCLPIAGGSPFFTCHNCFELLQLPKKTLVMEKNHKQKMRCGVCSSEIKFSVINKKLVICLHSETEDSATSTRIDDTANEVVNSHLSHSRGDANTSAVNFSSDDYSGYDFHSVDRESPVLAGEPSLNSSKSREMQSFHSSSSPSTSDDENSPEVMNAPSEATNKSIHQPSKSSDQSPPPSGSCNNNAVSRLGKGNQSNRSDQGKENIEKNASRKNSLKEVVLASEMDVHDYSNTGVSQDSGDASGEHDHPRSNKRGESFLANIIKRDSSKSNVTVNGQPIPDRVIKKAEKLAGPIQPGNYWYDFRAGFWGVMDGPCLGIIMPFIEEFQHPMPDKCAGGNTGVFVNGRELHQKDLDLLSRRGLPRDSNRSYIIEISGRILDEDTGEELDSLGKLAPTVEKERRGFGMKVPRAAA 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00609 896 MobiDBLite consensus disorder prediction 90 149 - -
Cca11g00609 896 PANTHER EXTRA-LARGE G-PROTEIN-LIKE 1 894 IPR040244 GO:1900150
Cca11g00609 896 MobiDBLite consensus disorder prediction 605 684 - -
Cca11g00609 896 MobiDBLite consensus disorder prediction 79 168 - -
Cca11g00609 896 Coils Coil 219 246 - -
Cca11g00609 896 Pfam Probable zinc-ribbon domain 490 535 IPR021480 -
Cca11g00609 896 MobiDBLite consensus disorder prediction 600 740 - -
Cca11g00609 896 PANTHER EXTRA-LARGE G-LIKE PROTEIN 1 894 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00609 Cca-Chr11 9889496 9894697 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00609 - - gmx:100798240 1457.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00609 11 9889496 9894697 Cca11g00609 11 9889496 9894697 ECH