Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00596 ATGAAGAATTTGCAGAGCTCGGAAGAATTACAGTCATCAACTCAAGCTTCTCATGAGCCCAAGAGTGAACAACCAAACAATCACACAACCGATGCTCCTGTTACAGACACAGGCTCAGCATCTGCTTCAAGTAATGACAGCAAAAAGGTTTCACGGCAGGATATTGAGTTTGTCCAGAATTTAATAGAAAGGTGCCTACAGTTATATATGAATAAAGATGAAGTGGTTAAAACACTATTGACTCGGGCAAAGATAGATCCCGGATTCACGACTCTCGTATGGCAGAAGTTGGAAGAAGAGAATACGGATTTCTTCAGGGAATACTATATCAGGCTAAAATTGAAAAAGCAAATAGTTTTATTTAATCATTTACTTGAGCATCAGTATCATCTGATGAAGTGTCCCATGCCTACAAAGGTTCCATTGGCTCCAATACAGAATGGAATCCATCCTGTCAACAACCTACCTATTGGATACCCAGTGTTACAGCAGCCTCCCATTCCAGCTACAGGTCAACCTCATATTGACTCCATGGGTTGTGGTATATCAAGTTGTCATGTAGTTAACGGAGTCCCTGCCCCAGGCAACTTTCATCCCATTCGGATAAATTCCGGAAACGATATGGTGATGGACCATAGTGCTCCTGACATGGCTACTGTTATTCCACCAAATGGTGCAATGTCATCCGTCTCAGAAATGCCAGTAAGTCCAACATCAGTAGCATCCAGTGGTCATTTCCCCTTCACTGCATCAGAGATATCAGGAATGGGCGCAGATACATCAGCTCTTGATACAGCATTTACATCTGATGTGGCAAGTTCAGTTGGATTACAGCTTGCACCAGATGGTGGCAATGGAATTTCCAGATCGTTGGATCAAATTCAATGGAATTTTAGCCTATCAGATCTAACAGCAGATTTGCCAAACTTGGGAGATCTAGGAGCTCTGGGAAACTATCCTGGTTCACCATTTTTGCCGTCAGATTCAGATATTTTGCTCGAGTCTCCTGATCAACAGGACATAGGTAATGCTTACATACAACCATACATAAATTTTAATTATACAGTTGAGATTCACCCTTCTTATACCCTCATCTCTTACTTGATATGCTTCTAG 1116 0.4176 MKNLQSSEELQSSTQASHEPKSEQPNNHTTDAPVTDTGSASASSNDSKKVSRQDIEFVQNLIERCLQLYMNKDEVVKTLLTRAKIDPGFTTLVWQKLEEENTDFFREYYIRLKLKKQIVLFNHLLEHQYHLMKCPMPTKVPLAPIQNGIHPVNNLPIGYPVLQQPPIPATGQPHIDSMGCGISSCHVVNGVPAPGNFHPIRINSGNDMVMDHSAPDMATVIPPNGAMSSVSEMPVSPTSVASSGHFPFTASEISGMGADTSALDTAFTSDVASSVGLQLAPDGGNGISRSLDQIQWNFSLSDLTADLPNLGDLGALGNYPGSPFLPSDSDILLESPDQQDIGNAYIQPYINFNYTVEIHPSYTLISYLICF 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00596 371 MobiDBLite consensus disorder prediction 1 48 - -
Cca11g00596 371 PANTHER OS02G0137100 PROTEIN 1 347 IPR006476 -
Cca11g00596 371 Pfam Plant protein 1589 of unknown function (A_thal_3526) 58 109 IPR006476 -
Cca11g00596 371 PANTHER HELICASE WITH ZINC FINGER PROTEIN 1 347 - -
Cca11g00596 371 MobiDBLite consensus disorder prediction 1 49 - -
Cca11g00596 371 TIGRFAM A_thal_3526: uncharacterized plant-specific domain TIGR01589 55 111 IPR006476 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00596 Cca-Chr11 9621707 9630160 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00596 - - gmx:100809603 650.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00596 11 9621707 9630160 Cca11g00596 11 9621707 9630160 ECH