Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00592 ATGATGTTGACAATGATCATCATTGTGCTCATCACTTCCTTACTCGTGGGGTTTTTCATTGGTCCAATCAATGGCAGACGGCAAAGGAAGAGAGCTGTTGGGTTCTTCCATCCGTACACCAATGATGGCGGTGGTGGAGAAAGGGTGTTGTGGTGCGCTGTTAGAGGCATCCAAGAGGAGAGACACGACCTTGACTGCTATGTATACACTGGAGATCATGAAGCCACCCCGCAATCGTTGATGGCTCGGGCCCTTGATCGCTTTGGGGTCACGCTCCTCTCTCCTCCAAAGGTGGTTCATTTGTACAAGAGAAAGTGGATTGAAGAAACCACTTATCCACACTTTACAATGATTGGTCAAAGTCTGGGTTCTATGTATCTTGCATGGGAGGCTTTGTGCAAGTTTACCCCTTTATATTACTTTGACACAAGTGGATATGCTTTTACATATCCACTTGCTCGATTGTTTGGATGCAAAGTTATTTGCTATACACATTATCCTACTATTAGTTCAGACATGCTAGCTCGTGTTCGTCAACACAGCCTGATGTATAATAATGATGCCTTAATTGCAAAAAGTGTTTGGCTTTCAAGGTGCAAAATAATCTATTATGCATTCTTCAGCTGCTTGTATGGGATTGTAGGATCTTGTGCACACCTAGCTATGGTCAATTCATCTTGGACCAAATCCCATATTGAAAATCTTTGGAGAGTTCCAGATCGTATTAAGCGAGTTTATCCTCCTTGTGATACCTCAGGACTCCAGGTACTTCCCTTGGAACGATCAGCAGAAGTTCCTGTACTAATATCTGTTGCACAATTTCGACCAGAGAAGGCCCACACTCTTCAACTTGAGGCTTTTTCAGCTGCCATTAAGAGATTAGATCCTAGCATGCCAAAACCTAAGTTTCAAATTGTGGGTAGCTGTAGAAATAAATCAGATGAAGACAGACTTCAAATGTTAAAAGAGAGAGCAATTGAGCTGAATGTGAATGAACATGTGGAATTTTACAAGAATGTAACATACAGAGAATTGGTGGGACTTTTAGGGGGTGCTGTTGCTGGCATTCATTCAATGACTGATGAGCATTTTGGCATTAGTGTTGTAGAATACATGGCTGCCGGTGCCATCCCAATTGCTCATAATTCTGCTGGCCCAAAAATGGACATTGTGTTGGATGAAGATGGACAGCAAACAGGATTTCTTTCCTGCACTGTTGAAGAATATGCTGATGCCATGGTGAGAATTGTAACGATGTCAGAGATGGAAAGGCTTAAGATGGCTGCAGCTGCAAGGAGACGAGCAAGCAGGTTTTCCGAGCAGAGGTTTTATGATGATTTCAAAGCTGCTATACATCCTATTCTGAGTCATATTTCTAGGTGA 1383 0.4266 MMLTMIIIVLITSLLVGFFIGPINGRRQRKRAVGFFHPYTNDGGGGERVLWCAVRGIQEERHDLDCYVYTGDHEATPQSLMARALDRFGVTLLSPPKVVHLYKRKWIEETTYPHFTMIGQSLGSMYLAWEALCKFTPLYYFDTSGYAFTYPLARLFGCKVICYTHYPTISSDMLARVRQHSLMYNNDALIAKSVWLSRCKIIYYAFFSCLYGIVGSCAHLAMVNSSWTKSHIENLWRVPDRIKRVYPPCDTSGLQVLPLERSAEVPVLISVAQFRPEKAHTLQLEAFSAAIKRLDPSMPKPKFQIVGSCRNKSDEDRLQMLKERAIELNVNEHVEFYKNVTYRELVGLLGGAVAGIHSMTDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLDEDGQQTGFLSCTVEEYADAMVRIVTMSEMERLKMAAAARRRASRFSEQRFYDDFKAAIHPILSHISR 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00592 460 Pfam Glycosyl transferases group 1 265 432 IPR001296 GO:0016757
Cca11g00592 460 Coils Coil 311 331 - -
Cca11g00592 460 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 32 455 - -
Cca11g00592 460 PANTHER GDP-MAN:MAN(3)GLCNAC(2)-PP-DOL ALPHA-1,2-MANNOSYLTRANSFERASE 22 455 IPR038013 GO:0004377
Cca11g00592 460 CDD GT4_ALG11-like 31 446 IPR038013 GO:0004377
Cca11g00592 460 Pfam ALG11 mannosyltransferase N-terminus 31 236 IPR031814 -
Cca11g00592 460 Gene3D Glycogen Phosphorylase B; 254 438 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00592 218 443 Glycosyltransferase AT1G78800 26.923 6.36e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00592 K03844 - gmx:100808662 853.973