Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00582 ATGTCCCTCCTCGCTGGTCTTACCCGCCAAAATTCAGCCACCGCCACGCTGCTCACGCGCCACCTCTCCTCCGCCGCCTCCAAACTCCACGCCTGCTACACTTTCAAACCCCCTTCTTCTCTCACTCCCGAGGCCCAATGCCCCAATTCCCCTCCCACCAAGCCCAACCAGAAAAAGGCCAAGCCCAAGTACCGGCCCCCCTCCTCCCTCGACCGGAGTGGCCGCAAAACGGTCCGTTCCGACGACTTGCCCTTCGACTTCCGATTCAGCTACACGGAGAGCAGCCCCAAGGTGCGACCCATCGGGCTGAGGGAGCCCAAGTACTCGCCCTTTGGGCCGGACCGGCTCGACCGGAAGTGGACCGGAGTGTGTGCCCCCGCGGTGGACCCCACGGTGCAGACCTTGGAGGGTGCGGAGGACCCTAAGTTGGAGGAGCAAAGGAAGAAGAAGAGAGAGATGATTCAAGGAAAACCGCTTTCCAGTGATGAGAGAAAGGCACTGGTTTCGCAATGCGAGAGAAGCAAAACTAACAAGCATGTCAATATCGGGAGGGATGGTTTAACTCACAACATGCTGAATGTTATTCATAACCATTGGAAATTTGCTGAAGCAGTTAGAATCAAATGCATGGGTGTTCCAACGATGGACATGAATAATATTTGTACCCAGCTTGAGGACAAAACATTTGGGAAGGTCATTTTCAGACATGGGGGTACACTTGTATTATACAGAGGCAGGAATTATAATCCAAAAAAGAGGCCTGTAATTCCTCTTATGTTGTGGAAACCCCATGAACCTGTATATCCCAGACTGATCAAGACAACAATTGATGGTTTAAGTATTCAGGAAACAAAAGAAATGCGGAAGAGAGGACTAACTATTCCTGCTTTAACAAAACTTGGACCTGGTCCCCTGTATTCTGGTGACATTTGA 933 0.5145 MSLLAGLTRQNSATATLLTRHLSSAASKLHACYTFKPPSSLTPEAQCPNSPPTKPNQKKAKPKYRPPSSLDRSGRKTVRSDDLPFDFRFSYTESSPKVRPIGLREPKYSPFGPDRLDRKWTGVCAPAVDPTVQTLEGAEDPKLEEQRKKKREMIQGKPLSSDERKALVSQCERSKTNKHVNIGRDGLTHNMLNVIHNHWKFAEAVRIKCMGVPTMDMNNICTQLEDKTFGKVIFRHGGTLVLYRGRNYNPKKRPVIPLMLWKPHEPVYPRLIKTTIDGLSIQETKEMRKRGLTIPALTKLGPGPLYSGDI 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00582 310 MobiDBLite consensus disorder prediction 137 162 - -
Cca11g00582 310 SUPERFAMILY YhbY-like 158 254 IPR035920 -
Cca11g00582 310 MobiDBLite consensus disorder prediction 64 79 - -
Cca11g00582 310 SMART CRS1_YhbY_2 159 244 IPR001890 GO:0003723
Cca11g00582 310 PANTHER CRS2-ASSOCIATED FACTOR 1, MITOCHONDRIAL 7 307 - -
Cca11g00582 310 MobiDBLite consensus disorder prediction 138 159 - -
Cca11g00582 310 Pfam CRS1 / YhbY (CRM) domain 159 244 IPR001890 GO:0003723
Cca11g00582 310 PANTHER CRS2-ASSOCIATED FACTOR 1, CHLOROPLASTIC 7 307 IPR044599 GO:0000373
Cca11g00582 310 ProSiteProfiles CRM domain profile. 157 255 IPR001890 GO:0003723
Cca11g00582 310 MobiDBLite consensus disorder prediction 40 79 - -
Cca11g00582 310 Gene3D - 158 255 IPR035920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00582 Cca-Chr11 9224546 9228014 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00582 - - gmx:100789954 556.214