Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00577 ATGAAAGCAAAACTTCTAGTGGAAGTGACATCTCATGTATCCCTTTCCACAATAGCTCTTGCAGTTGCTGCAAGTCAAACCGGAGGCAAGTTTGTGTGTATTCTCCCTGAGTCAGTCCTTGATGAATCAAAAGAAGTTATCAACAACTCAGGTCTTGAAGACCAAGTAGAATTTATAACCGATGAAGACCCTTCCAAGCTCCTATCCTACTATCAGAACATTGATTTCTTTCTTGTTGATTGCAAAGATGAGGACTATACAAGGTTGCTCAACTTGGTAGATGTTAATCTCACAAGGTCAATAGTGGTGGCAAAAAATCTGGTTGGTGGTGATAAAAAAAAATTAAGATGGTGTCTGAGAGGAAAGAATGAGAAATTAGAAGTAAGATCCCTAAAACATCCCGTAGAGAATGGCATGGAAGTTATTTGGATTAGCAAGAATGATGACACTAACAAGGGACATGAGATTGAAGGTGATTATAGTAGGAAAAGGACAAAGAGCTCATGGATTGCCAAATTTGATGAGGAGAGTGGTGAGGAACATATCTACAGAGTACCTCATGTTGATTGGTTCTGA 576 0.3906 MKAKLLVEVTSHVSLSTIALAVAASQTGGKFVCILPESVLDESKEVINNSGLEDQVEFITDEDPSKLLSYYQNIDFFLVDCKDEDYTRLLNLVDVNLTRSIVVAKNLVGGDKKKLRWCLRGKNEKLEVRSLKHPVENGMEVIWISKNDDTNKGHEIEGDYSRKRTKSSWIAKFDEESGEEHIYRVPHVDWF 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00577 191 Pfam Protein of unknown function (DUF1442) 3 184 IPR009902 -
Cca11g00577 191 Gene3D Vaccinia Virus protein VP39 1 161 IPR029063 -
Cca11g00577 191 PANTHER DUF1442 FAMILY PROTEIN 1 187 - -
Cca11g00577 191 PANTHER DUF1442 FAMILY PROTEIN 1 187 IPR009902 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00577 - - gmx:102660803 298.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00577 11 9123573 9124161 Cca11g00577 11 9123573 9124161 ECH