Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00574 ATGGACATTTTCAACACCTTCCCAATCCCCACTTTCTGCAACCCCAAAACCCTCACCTCAAAATTCCCCCCAAACCGCAAAAAACCCACATCCCCATTTCACAGAACCCCGTTTCCACTCCACCTTTCACGCTCCTCCGCCATAAAGTTTCAAACTTGGGCGCATTCTGGCCGACCCACCAACCGCCGCAATTCTCTGAGGAAAAAGCTCCTCCGTGATCACAAGGTACGCCCCAATCAGAATCCCAACGACCCTTTTTCTGTTTCCGGTAACGGCGTTGAAGAGAGTGGGGCTGGTGTTCAGGGGGTTTCCGTTGTTGACAATGCGATCGAAATTGAAAAACCAAAATCTAAGCTTTTGAGTGAGTCTGTTTTGTGGAATAAGTTGGAGAATTGGGTTGAGCAGTACAAGAAAGATATTGAGTTTTGGGGTGTAGGGTCTGGTCCTGTGTTCACTGTTTTTCAGGATTCCTTTGGAGGTGTCAAGAGGGTCTTTGTTGATGAAGAGGAGATTCTGAAGAGAAACAGGGTTAGGAAGGATGTGATTGGGGACTTCCCTGAAGTGAGAAATAAAATTCTCAAGGCTAACAACATGGCTAGGGAGATGGAGAGTGGGAATAGTGTGATTGCAAGGAATAGTTCTGTGGCTAAGTTTGTTGCCGAAGGTGAGAAGGAGGGTGGTTTTGTTAAGGCTGTTCGAGGTTTCGTTGCTCAACCAAGGTTGCTTCCGAGGCTCTCGGGGGTTGGGAGGAAAGTGTTGTATGTGTTGGTTGTTGTGTGGGCAGTGAAGAAGTTATTTGCTTTTCgagaaggagataaggaggtggagtatacagaaacagagaaggaaatgatgaggaggaagataaaggcaagaaaggagaaagagaagTTGGTGAAGGGCGCTGTTGAAGTTGTTTCTAAACCTTCGGAGACACTGGCGGTGGACATTAAAAAGCCTAATTTAGATAAGGAACAACTTAGGGATAGTATTCTGAAAGCCAAGACTTCTGTTGATAAAATGGTAGTGCATGATTCGTCTGATAAAGTGCAAACTAGATCCACAGAGATGGATTATAAAGTTCAAGAAATAAGAGAAATGGCTAGGCGGGCACGAAAAATTGAGGGAAGAGATCATGTTCTAGCTAACAAGGACAAAATTGAGGGAGGAGATCATGTTCTAGCTAGAAGGGACATGGAAATGGATGATCCTGTGGTTGAGAAACCGTCTGATGATAATAAAGTCACAAAATCAAAGAGTGAACGAGATGACAGTTTAAGTAATCATCAAAAGGAAGTTGCTAGGGAAACAGCCAATAGTAAGGCCATTATGCAATCAACTTCTGTTGATGTGCCAGAGAACATTGATAATTCAGTCCTGCGTGAGGTAGTTCCTGCAAATAAAGGGAATTTATATGCTTCGGATCCCATAGTTCCTGGTGACAGGGAAATCAAGAAAAAGGAAATAGAATTTACTGAAAATGATGTGCACCTGAAGGACAGAGAAAACGACAAGCTCTCAGATTCTTCTATTAATGGCTCATCTGTGCCAAATGAAAGTTCTGCAAAGAAGCCCAGGATCATACGGTCTGTTAAAGAAGCTAGGAATTATCTTTCGAAAAAACATGACAAACAACATCCTGGCACTGGCACAGAATATAAAAGTGAACTCACGAAAGATAAGATTGCTGATTTGAAGTCTTCAAGTGTTATTGATTTTAATGACCAGAAGTGCCAGAAGTTGGAGAAGAATACAACTGTGTCTAAAAATGACACATTAAACGAAATATTGGATTCTGTGCCTCTCATAAATGCTAGTCAAGATTCTAATCAGAAGGATAAGGAACTAAGCCCTATAAATAATGACCACATCAAAGATTCGGTTATTGAACCTAGATTGGAAGACCTTCAAAAGTATGAGACCATTTTAGACCATGAAGTTAGTGACATTGCTCCAGAGACAAGGCTATCTGTAAGGCCAGAAAATTGGCTGGAGAAAAACCTCAACAAAGTTGAACCCATAATCGAGCAAAGTAGAAGTGAGGCTTTAGATGGATTATCAGATTCTAAGCCTGCCACAAATCCTGGTGAAGATTCTAATCAAAAGGATATGGAATCAAGCCCTACAAAGGATGACTATTTCAAAGACTCTGGTGCTAAACCTGGCATAGGAAACCTTGATAAGTCTGAGCCCAATTTATACCCTAAAGTTAATGGCATTGCTACAGAGACAATGCTGCCTGTAAAGCCAGAAAATTGGCCGGACAAAAACCTCCTTGAAGTTGAGCCCATAGTTGAGCAAATAAGTAATGATGCTTTAAATGGATTATCAGATTCTAAGCCTGCCACAAATCCTAGTGAAGATTCTGATCAGAAGAATAAGGAATTTGGCTCAACAAAGCATGACTACCTCAAAGACACTGGCGTTAAACCTGAAATAAGAAACCATCAAAAGTCAGGCGCTACTTTGGACGGTGAAGTTAAGGGCATTAATACAGGGACCACAGAGTCTGGAAAGACAGAGAATTGGCTGGAGAAAAACTTCCATGAAGTTGAACCCATAGTTAAGCAAATTAGAGAAGGATTTAGAAATAACTACATGGCTGCAAAAGAGAGAGTTAATCAACCTTTAGATATACCCACCGAGATGGAATCACTTGGAGTTGTTGAAGATGGTGGGGAATTTGACTGGATGCAGGATGATCATCTTAGAGATATTGTCTTTCGAGTCCGTGATAATGAACTGTCGGGACGGGACCCATTTTATTTGATGAATGACGAAGATAAGGAAGCATTTTTCAGAGGTCTTGAGAAAAAAGTGGAGAAAGAAAATAAAAATCTTTCTTATGTTCATGAATGGCTCCATTCAAATATTGAAAATCTGGATTACGGAGAAGATGGCATCAGTATATATGATCCACCAGAGAAAATCATACCACGATGGAAAGGGCCTCCTGTGGAGAAAGTTCCCGAGTTTCTAAATGAATTCCTTGATGAAAGAAAGACTAGTTCCACTAAAAATATGAACCCGGTGAAGAAGGATGAGAGTGCCTTTGCTAAAAAATCAGTTGATCCCTCCTCTTTACATAAAAAGGTTAGTGGCTCTACAGCACCTATCAAGAAGATGAAAAATCCAAAGACTGTTATTGAAGGAAGTGATGGTTCTGTTAAAGTTGGCAAAAAATCAGGGAAGGAATATTGGCAACACACAAAGAAATGGTCCCAAGGTTTTTTGGACTCTTACAATGCTGAGACAGACCCAGAGATAAAGTCCGTAATGAAGGATATGGGGAAGGATTTAGATCGCTGGATCACTGAAAAAGAAATAGGGGAAGCAGCTGATCTAATGGACAAACTACCTGATAAGAACAGGAGTTTCATGGAAAAGAAACTCAACAAGATTAAAAGAGAGATGGAGTTGTTTGGACCACAAGCAGTGGTTAGCAAATATCGTGAATATGCAGATAACGAAGAGGAAGATTACTTGTGGTGGTTAGATCTTTCACATGTACTGTGCATTGAAATGTACACAGTTGAGGATGGAGAGCAGAGAGTAGGACTTTATTCATTGGAGATGGCTACAGATCTTGAATTGGAACCAAAGCCATATCATGTAATTGCTTTTCAAGATCCTGGTGACTGCAAAAATCTTTGTTACATAATTCAGGCTCATATGGAAATGCTGGGAAATGGCCACGCCTTTGTTGTTGCACGGCCTCCTAAGGATGCTTTTCGAGAAGCTAAAGCAAACGGGTTTGGTGTTACGGTCATCAAGAAAGGTGAACTTCAGCTCAATATAGACCAACCACTAGAAGAAGTGGAGGAACAGATTACAGAGATTGGCAGCAAAATGTATCATGATATGATGATGAAGGAGCAATCTGTGGATATAAATTCATTAATGAAAGGTGCATTTGGTTTTAGTGACCGCTCCATCAAGAGGTTAAAGCGGAAGTTGAAGAAACCCAAAAAGGGGTGA 3978 0.4015 MDIFNTFPIPTFCNPKTLTSKFPPNRKKPTSPFHRTPFPLHLSRSSAIKFQTWAHSGRPTNRRNSLRKKLLRDHKVRPNQNPNDPFSVSGNGVEESGAGVQGVSVVDNAIEIEKPKSKLLSESVLWNKLENWVEQYKKDIEFWGVGSGPVFTVFQDSFGGVKRVFVDEEEILKRNRVRKDVIGDFPEVRNKILKANNMAREMESGNSVIARNSSVAKFVAEGEKEGGFVKAVRGFVAQPRLLPRLSGVGRKVLYVLVVVWAVKKLFAFREGDKEVEYTETEKEMMRRKIKARKEKEKLVKGAVEVVSKPSETLAVDIKKPNLDKEQLRDSILKAKTSVDKMVVHDSSDKVQTRSTEMDYKVQEIREMARRARKIEGRDHVLANKDKIEGGDHVLARRDMEMDDPVVEKPSDDNKVTKSKSERDDSLSNHQKEVARETANSKAIMQSTSVDVPENIDNSVLREVVPANKGNLYASDPIVPGDREIKKKEIEFTENDVHLKDRENDKLSDSSINGSSVPNESSAKKPRIIRSVKEARNYLSKKHDKQHPGTGTEYKSELTKDKIADLKSSSVIDFNDQKCQKLEKNTTVSKNDTLNEILDSVPLINASQDSNQKDKELSPINNDHIKDSVIEPRLEDLQKYETILDHEVSDIAPETRLSVRPENWLEKNLNKVEPIIEQSRSEALDGLSDSKPATNPGEDSNQKDMESSPTKDDYFKDSGAKPGIGNLDKSEPNLYPKVNGIATETMLPVKPENWPDKNLLEVEPIVEQISNDALNGLSDSKPATNPSEDSDQKNKEFGSTKHDYLKDTGVKPEIRNHQKSGATLDGEVKGINTGTTESGKTENWLEKNFHEVEPIVKQIREGFRNNYMAAKERVNQPLDIPTEMESLGVVEDGGEFDWMQDDHLRDIVFRVRDNELSGRDPFYLMNDEDKEAFFRGLEKKVEKENKNLSYVHEWLHSNIENLDYGEDGISIYDPPEKIIPRWKGPPVEKVPEFLNEFLDERKTSSTKNMNPVKKDESAFAKKSVDPSSLHKKVSGSTAPIKKMKNPKTVIEGSDGSVKVGKKSGKEYWQHTKKWSQGFLDSYNAETDPEIKSVMKDMGKDLDRWITEKEIGEAADLMDKLPDKNRSFMEKKLNKIKREMELFGPQAVVSKYREYADNEEEDYLWWLDLSHVLCIEMYTVEDGEQRVGLYSLEMATDLELEPKPYHVIAFQDPGDCKNLCYIIQAHMEMLGNGHAFVVARPPKDAFREAKANGFGVTVIKKGELQLNIDQPLEEVEEQITEIGSKMYHDMMMKEQSVDINSLMKGAFGFSDRSIKRLKRKLKKPKKG 1325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00574 1325 MobiDBLite consensus disorder prediction 1003 1040 - -
Cca11g00574 1325 MobiDBLite consensus disorder prediction 785 821 - -
Cca11g00574 1325 MobiDBLite consensus disorder prediction 1003 1027 - -
Cca11g00574 1325 PANTHER EMBRYO DEFECTIVE 1703-RELATED 769 1323 - -
Cca11g00574 1325 PANTHER EMBRYO DEFECTIVE 1703-RELATED 678 769 - -
Cca11g00574 1325 PANTHER EMBRYO DEFECTIVE 1703-RELATED 6 679 - -
Cca11g00574 1325 MobiDBLite consensus disorder prediction 18 38 - -
Cca11g00574 1325 MobiDBLite consensus disorder prediction 391 436 - -
Cca11g00574 1325 MobiDBLite consensus disorder prediction 773 840 - -
Cca11g00574 1325 MobiDBLite consensus disorder prediction 680 735 - -
Cca11g00574 1325 MobiDBLite consensus disorder prediction 391 449 - -
Cca11g00574 1325 MobiDBLite consensus disorder prediction 494 529 - -
Cca11g00574 1325 MobiDBLite consensus disorder prediction 703 717 - -
Cca11g00574 1325 MobiDBLite consensus disorder prediction 536 555 - -
Cca11g00574 1325 PANTHER EMBRYO DEFECTIVE 1703-RELATED 6 679 - -
Cca11g00574 1325 PANTHER EMBRYO DEFECTIVE 1703-RELATED 678 769 - -
Cca11g00574 1325 PANTHER EMBRYO DEFECTIVE 1703-RELATED 769 1323 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00574 - - ccaj:109807902 2566.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00574 11 9075538 9081127 Cca11g00574 11 9075538 9081127 ECH