Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00560 ATGTTATGCGTTTTCAGGGGATTCCAAGACAACACTGATAACATCCAAATTAACACTGATACCCGCACTCGCAAGCAAAGAGAAAATTCCTGGTTTTCCAGTTCATTGAGATCAAGGATGCAATATTTGTGGCCAAATCCAGGGCTTCCCTGTCTAAATGAGCAGGCACAGCCAGAAATATCATTAGATCCTTCTACAGGTCCAGTTGGTGCTTTTTGTCTACTGATCCTGGAACCAAATCAGGTTGATTACTTGAATCTGAAGAGTAACCAGAGGTTAACATTCAAATCAAGTGGGAGTGCTGCAGCAAAGAAAAGTTGGATTGTGGAGAGGGTCAACCCATAA 345 0.4232 MLCVFRGFQDNTDNIQINTDTRTRKQRENSWFSSSLRSRMQYLWPNPGLPCLNEQAQPEISLDPSTGPVGAFCLLILEPNQVDYLNLKSNQRLTFKSSGSAAAKKSWIVERVNP 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00560 114 SUPERFAMILY FMN-binding split barrel 5 114 - -
Cca11g00560 114 PANTHER PYRIDOXINE/PYRIDOXAMINE 5'-PHOSPHATE OXIDASE 2 4 27 - -
Cca11g00560 114 PANTHER PYRIDOXINE/PYRIDOXAMINE 5'-PHOSPHATE OXIDASE 2 25 114 - -
Cca11g00560 114 Gene3D - 23 114 IPR012349 -
Cca11g00560 114 PANTHER PYRIDOXINE-5-PHOSPHATE OXIDASE 4 27 IPR000659 GO:0004733|GO:0008615|GO:0010181
Cca11g00560 114 PANTHER PYRIDOXINE-5-PHOSPHATE OXIDASE 25 114 IPR000659 GO:0004733|GO:0008615|GO:0010181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00560 K00275 - gmx:100779815 171.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00560 11 8750920 8754101 Cca11g00560 11 8750920 8754101 ECH