Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00534 ATGAATAAGCGTCAAAATCTGAGACGCATGCAATATGTCCCTAAATTTTATACACTTGAAGGCAATCGATACTATATATATATAGACTATCCTGAATTCAGAAATCCCAACAATTTTAATTTCAACTTCAAGGCAAGTGTCTTCTTTTTGATGGAGAGACCCAAAGAAGTGGAGAATGGAGAGTATGACTACAAGGAAAACCAAGGAATAACAAAGCCATCTTACATGATGATGTTCATCTCATCTTTGTTGATAAGCATAGTAGGAGGGTCTTTGCTTGGGTGGTGGCTATACAAATACCATCCAACAAATAGGCAACTTTGGATGGTACCCTTTGGCCTCATTCTTTTTTTAACCCCAGTCATTGTTTGGCTCTCCCTCATCATCTCTGATCTGTGTATTTCCACAAACAAGGAAGAGGATGTTCTTAGGATGAATCAACGCATTCATCCACTGAATGACTCTCTTAAGAGATGA 477 0.3816 MNKRQNLRRMQYVPKFYTLEGNRYYIYIDYPEFRNPNNFNFNFKASVFFLMERPKEVENGEYDYKENQGITKPSYMMMFISSLLISIVGGSLLGWWLYKYHPTNRQLWMVPFGLILFLTPVIVWLSLIISDLCISTNKEEDVLRMNQRIHPLNDSLKR 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00534 158 Pfam Putative AtpZ or ATP-synthase-associated 79 130 IPR032238 -
Cca11g00534 158 CDD TM_PBP2 76 130 IPR000515 GO:0016020|GO:0055085
Cca11g00534 158 PANTHER OS08G0113900 PROTEIN 56 152 - -
Cca11g00534 158 PANTHER OS08G0113900 PROTEIN 56 152 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00534 - - gmx:100527112 160.614