Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00522 ATGGGAAACTGCGTTTTCAAGGGGTTGCAACATGGCGTGTCGGAAGACACCATGGTGAAGGTTGTCACCTCAAACGGAGGCATCATGGAGCTCTTCTCTCCCATAACCGTCGAGTGCATAACCAACGAGTTCCCCGGCCACGGCATCTTCCGGAGCCGCCGCGACATCTTCTCTGAACCGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCAAAACCGATGAGCTCCACGGCGGCCAAGTCTACTATCTCCTGCCTCTCAATCCTTCTTCTTCCAAAAGCTTCACGAGACAATTCTCCGACGTCCCCATGACGCCGTATCGAATGTCCACGTGTGATaaaaataacaataacaacaacaataacatgtactcggaaccagaaGTGGTTCCGAGATACAATAGTAGTGGGGTGTGGAAGGTGAAGTTGGTGATCAACCCCGAGAAGCTGTCGGAGATTTTGTCGCAGGAGTCGCGGACGGAGGCGTTGATAGAGAGCGTGAGGACGGTGGCGAAGTGCGGCAACGGTGTGCCGTCGTCGGTGGCCAACTCCGATCAATGGAGTGTGGCAAGCAGTTGGAAAGGTTCTATGTCGGAGAAGATAGGTTTAGAATAG 729 0.4074 MGNCVFKGLQHGVSEDTMVKVVTSNGGIMELFSPITVECITNEFPGHGIFRSRRDIFSEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKTDELHGGQVYYLLPLNPSSSKSFTRQFSDVPMTPYRMSTCDKNNNNNNNNMYSEPEVVPRYNSSGVWKVKLVINPEKLSEILSQESRTEALIESVRTVAKCGNGVPSSVANSDQWSVASSWKGSMSEKIGLE 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00522 242 PANTHER PLASTID MOVEMENT IMPAIRED PROTEIN-RELATED 109 230 - -
Cca11g00522 242 PANTHER PLASTID MOVEMENT IMPAIRED PROTEIN-RELATED 1 61 - -
Cca11g00522 242 MobiDBLite consensus disorder prediction 145 166 - -
Cca11g00522 242 Pfam PADRE domain 1 213 IPR025322 -
Cca11g00522 242 PANTHER DUF4228 DOMAIN PROTEIN 109 230 - -
Cca11g00522 242 PANTHER DUF4228 DOMAIN PROTEIN 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00522 Cca-Chr11 7416183 7416911 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00522 - - gmx:102665356 310.071
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00522 11 7416183 7416911 Cca11g00522 11 7416183 7416911 ECH