Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00510 ATGGCCTCAACCTCTTCTGCTCTCACCATATCCTCTTCTTCCACCCTTCTTGATGCCAAGGCTCCAAGACAGTCACCAGCTGCTTCCCCACAATGTGTCAGCCTCCCCCCTCCACCTTTGCACTCTCACAACCGCTCATGGAAGACCTCTACTTATTGTCGCAAGGTTGCTCGTAATGTTATGGCAATGGCCACAGGAGAGGCACCAGCTGAAGTTGCCACAACTGAGACGCCAGAGTTTGTCAAGACTCTTCAAGAAGCTTGGGACAAAGTTGATGATAAGTATGCAGTGAGTTCACTGGCCGTGGCTGGTGTGATTGCATTGTGGGGCTCAGTTGGGTTGATCTCAGCAATTGATAGGCTTCCTTTGATTCCTGGGGTTCTTGAGGTTGTAGGCATTGGCTACACTGGGTGGTTTGCATATAAGAACATAGTTTTCAAGCCAGACAGGGAAGCTTTGGTACGGAAAATAAAAGAAACATATAATGAAATACTGGGGAGCAACTGA 507 0.4832 MASTSSALTISSSSTLLDAKAPRQSPAASPQCVSLPPPPLHSHNRSWKTSTYCRKVARNVMAMATGEAPAEVATTETPEFVKTLQEAWDKVDDKYAVSSLAVAGVIALWGSVGLISAIDRLPLIPGVLEVVGIGYTGWFAYKNIVFKPDREALVRKIKETYNEILGSN 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00510 168 PANTHER - 1 167 IPR033344 GO:0009579
Cca11g00510 168 Pfam CAAD domains of cyanobacterial aminoacyl-tRNA synthetase 82 166 IPR025564 -
Cca11g00510 168 PANTHER PROTEIN CURVATURE THYLAKOID 1B, CHLOROPLASTIC 1 167 - -
Cca11g00510 168 MobiDBLite consensus disorder prediction 16 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00510 Cca-Chr11 7222349 7225354 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00510 - - gmx:100306403 299.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00510 11 7222349 7225354 Cca11g00510 11 7222349 7225354 ECH