Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00507 ATGAGTGGTTCCTTTGGTGACGTGAAGTGCTTACGCAATGGTGAAGTAGTGGAAGCCCACAGGCCACAACAGAATTTACATCATAGCCATGGCCAGCACAAAACCATTGATATTGTTAACCGACCTAGCATCCACCGTCGGATGAAGAGTTACTCGGATGAGGCATGGAAGACAACAAGGCTTTCGACGAGTTTCAATGTGAAGAGTGAGAGAGTTTCGAACTGGAGGGACTTCTTGAGACTCCACTGCCACCCCATTGAGGAGTACATTGAGGAATGGCCAGCGAAGCCTTCATCATTGAGGGAAGATGTGGCGGAGTATAGCAGAAGGATGAGGGGGTTAGCGGTGAAGTTGGTGGAGGCAATATCAGAAAGTTTGGGGTTGGAGAAAGATTACATAGAGAAAGCAATGGGGAAGCACATGGCGATAAACTACTACCCGGCATGCCCAGAGCCAGAGTTAACCTATGGGTTGCCACCTCATGCTGATCCAAATGCAATTACCATTTTGCTGCAAAATCAGGTGCCTGGCTTGCAGATTCAGGTGATAAGCAACGACAGGTACAAGAGTGTGCTGCATCGAGCATTGGTGAATAGTGAGAAGGAGAGAATGTCCATTCCAACGTTCTATTGCCCTTCACCAGACGCAGTCATGAAACCAGCACCACAACTCGTGGACGATGATCATCCTGCGCACTACACAAGCTATGCATACGCTGAATACTACACCAACTTCTGGAACAGAGGACTGTCAAAGGAATCCTGCGTCGACATCTTCAAGCTTCAAAACTAA 792 0.4798 MSGSFGDVKCLRNGEVVEAHRPQQNLHHSHGQHKTIDIVNRPSIHRRMKSYSDEAWKTTRLSTSFNVKSERVSNWRDFLRLHCHPIEEYIEEWPAKPSSLREDVAEYSRRMRGLAVKLVEAISESLGLEKDYIEKAMGKHMAINYYPACPEPELTYGLPPHADPNAITILLQNQVPGLQIQVISNDRYKSVLHRALVNSEKERMSIPTFYCPSPDAVMKPAPQLVDDDHPAHYTSYAYAEYYTNFWNRGLSKESCVDIFKLQN 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00507 263 Pfam 2OG-Fe(II) oxygenase superfamily 140 212 IPR044861 -
Cca11g00507 263 PANTHER PROTEIN DMR6-LIKE OXYGENASE 2-LIKE 179 255 - -
Cca11g00507 263 SUPERFAMILY Clavaminate synthase-like 46 249 - -
Cca11g00507 263 PANTHER PROTEIN DMR6-LIKE OXYGENASE 2-LIKE 46 180 - -
Cca11g00507 263 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 46 180 - -
Cca11g00507 263 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 179 255 - -
Cca11g00507 263 Gene3D - 40 249 IPR027443 -
Cca11g00507 263 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 132 212 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00507 Cca-Chr11 7186852 7188059 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00507 62 261 Glycosyltransferase AT5G59530 31.466 2.30e-27 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00507 K24028 - gmx:100788012 366.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00507 11 7186852 7188059 Cca11g00507 11 7186852 7188059 ECH