Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00506 ATGAGAAGCATGAGACTTTTGAAGTTGGAGAAAGAGGCCCTTGTAAAGGGTGTTCCAATTGGACAAGCTCTTGATATACACATTCCCCCTCCACGGCCCAAAAGAAAACCAAGCAATCCTTATCCTCGGAAGACCAAGATTGGTACCGCAACATTACATAGTGGAGCAAAGGATGGAAAACTCAATTTAGTTGAATCTTCACATGTCAACCAAGAACTGGACTTGGAAAAAGAACCATTTCCGGAGAAACATGATTCAGACGAAGGGCCAACAACTGTAAAAGAAAATAAGGATGAAAACCGCTCAAATGCATTTACTCTTCTCCAGGAGGTACCCTGTTCCTCTGTATCTTCAGCAAACAAGAGTTCAATAACAATGTCAATGCCACTGGGAAATTCATGCGCCTTAAAGGAGATTACACCTTCAGTTACAGAGGTAATAGCACGAGATGGAAAAACTGAATCTTTTGTCACTATTGAACTTGAAAATGGGAAGTTGGAGATCAATGATGGAAAACAAACTAATGTCACTAGTAAAGGCCCCACGTTAGAGAATTCTGATGCTGTACGAATGAAATTGATTCAAAGTGAGAAAACAGATGGTCTTGATTGTGCATTAACGATAGAGGGAATGCAAGGCAATCAGAATTACCCTAGACATGTTACTGTGCACGTTGTTGACGGGAACCTTGGAACAAGTGCTCAAAGTCAAAATCCATCAAAAGATATGTTGTTTCGAGACTCCATGTTTCAGCCAATAGGAGGGGTTAATGGCCAACCGAATCTTTTCACCAATTCAGGTGCATCGAACACAAGTGAAAGTCAAAATAACACAGCACGATCTTCTGTTCATCAATCATTTCTTCCTTGTGCTCCCTTCACACAACACAGCCAAGACGATTACCAATCATTTCTTCACATGTCTTCCACATTTTCAAATCTTATTGTCTCTACTCTGATGCAAAACCCAGCAGCTCATGCTGCAGCAAGTTTAGCCGCTACATTTTGGCCCTATGCAAATCCAGAAACTCCAGCAGATTCTCCTAGCTGCTCCCAAGGAGGTTTTACTTCTAGACAAATTGGCTCTCCTCCAAGCGTAGCAGCTATTGCAGCTGCTACTGTAGCTGCTGCAACTGCCTGGTGGGCAGCTCATGGATTGCTTCCCTTGTGCACTCCTCTTCATACTGCTTTTGCCTGTCCTCCTGCATCAGTGACTGCAGCTCCATCAATGAATAACGGTGAAGCACCGTCCCTGAATACAAAACAAGAAAAGGCTACTCTACAAAATCATCCTCTGCAAGATCAGATGCTGGATCCAGAATGCTCAGAAGCTCAACATTCACCTTCAAAGTCACCAGCTGTCATTTCATCAGATTCTGAGAGTGCAGATGCCAAGTTAAATACTTCACCAAAGGCTACTGATCATGAGACGAACAAAACAGTTTCCGAGCACCTTGATTCAAGCAAAACGAAGGGCAAAAAACAGGTTGACCGTTCCTCATGTGGTTCCAACACAGCCTCTAGCAGCGATGTGGAAACTGATGCACTAGAAAAGGATGAGAAAGGGAAGGAAGAGCCCGAAGCAAATGATGCTAACCATTTAGCTATTGATTCTTGTAATCGTCGTAGAAGCATTAGCAACCTTACTGATTCTTGGAAAGAGGTCTCTGAAGAGGGGAGATTGGCCTTTCAGGCTCTATTCTCCAGAGAGGTGTTGCCTCAAAGCTTTTCACCTCCTCATGCTTTGAAGAATAAGGATCATCAAATGGACATCAAGGATAACCAGCAAAACATAGATGAAAAGGCTGAAGACCTTGACAGCAAAAAATGCAGTTATAATTACGAAGAAATGCAGAAAGATTCGCCATTTATAGAAAATAACGAGGGACTGCTGCTGACCATAGGGCTTGGACAAGGAAAGCTTAAGACTCGTCGAACAGGCTTTAAACCCTACAAAAGATGTTCTATGGAGGCCAAGGAAAATAGGGTTGGAGCGGCCAGCAATCAAGGTGAAGAGAAAGGTTGTAAGAGAATACGTTTGGAAGGGGGGGAGACTTCGACTTGA 2064 0.4312 MRSMRLLKLEKEALVKGVPIGQALDIHIPPPRPKRKPSNPYPRKTKIGTATLHSGAKDGKLNLVESSHVNQELDLEKEPFPEKHDSDEGPTTVKENKDENRSNAFTLLQEVPCSSVSSANKSSITMSMPLGNSCALKEITPSVTEVIARDGKTESFVTIELENGKLEINDGKQTNVTSKGPTLENSDAVRMKLIQSEKTDGLDCALTIEGMQGNQNYPRHVTVHVVDGNLGTSAQSQNPSKDMLFRDSMFQPIGGVNGQPNLFTNSGASNTSESQNNTARSSVHQSFLPCAPFTQHSQDDYQSFLHMSSTFSNLIVSTLMQNPAAHAAASLAATFWPYANPETPADSPSCSQGGFTSRQIGSPPSVAAIAAATVAAATAWWAAHGLLPLCTPLHTAFACPPASVTAAPSMNNGEAPSLNTKQEKATLQNHPLQDQMLDPECSEAQHSPSKSPAVISSDSESADAKLNTSPKATDHETNKTVSEHLDSSKTKGKKQVDRSSCGSNTASSSDVETDALEKDEKGKEEPEANDANHLAIDSCNRRRSISNLTDSWKEVSEEGRLAFQALFSREVLPQSFSPPHALKNKDHQMDIKDNQQNIDEKAEDLDSKKCSYNYEEMQKDSPFIENNEGLLLTIGLGQGKLKTRRTGFKPYKRCSMEAKENRVGAASNQGEEKGCKRIRLEGGETST 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00506 687 MobiDBLite consensus disorder prediction 497 511 - -
Cca11g00506 687 MobiDBLite consensus disorder prediction 439 468 - -
Cca11g00506 687 MobiDBLite consensus disorder prediction 662 687 - -
Cca11g00506 687 PANTHER SWI/SNF COMPLEX-RELATED 8 668 - -
Cca11g00506 687 MobiDBLite consensus disorder prediction 24 99 - -
Cca11g00506 687 MobiDBLite consensus disorder prediction 439 535 - -
Cca11g00506 687 MobiDBLite consensus disorder prediction 469 496 - -
Cca11g00506 687 MobiDBLite consensus disorder prediction 70 99 - -
Cca11g00506 687 MobiDBLite consensus disorder prediction 512 531 - -
Cca11g00506 687 PANTHER PROTEIN LHY 8 668 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00506 Cca-Chr11 7143633 7150884 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00506 K12133 - gmx:100101859 1103.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00506 11 7143633 7150884 Cca11g00506 11 7143633 7150884 ECH