Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00503 ATGGCTGAGAATGAGAATGGTGAAGAAGTTCAATCAAATCGTCCAACTCCCCGCTTAAATGAAAGAATTCTTTCATCTTTGTCTAGGAGATCAGTTGCTGCTCACCCTTGGCATGATCTTGAAATTGGTACTCGTGTTGTGGAGATCACTAAGGGAAGCAAGGTCAAATATGAACTTGACAAAAAAACTGGATTAATTAAGGTTGATCGGATTTTGTATTCATCAGTTGTTTATCCCCATAACTATGGTTTCATCCCTCGAAGTCTATGTGAAGACAATGATCCACTTGATGTCTTGGTTATCATGCAGGAGCCAGTTGTTCCTGGTTGTTTCCTGAGAGCTAGAGCCATTGGATTGATGCCTATGATTGACCAGGGGGAGAAAGATGATAAAATTATTGCAGTATGTGCTGATGATCCAGAATATAAGCACTACACTGACTTCAAAGAACTTCCACCTCATCGCCTCACTGAGATTCGACGCTTCTTTGAAGACTATAAGAAGAATGAGAACAAGGAGGTAGCAGTTAATGAGTTTTTACCTGCATCCACTGCACTTGAAGCCATCCAACACTCAATGGATCTTTATGCAGAATATATTCTGCATACCTTGAGGAGATAG 621 0.4058 MAENENGEEVQSNRPTPRLNERILSSLSRRSVAAHPWHDLEIGTRVVEITKGSKVKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRSLCEDNDPLDVLVIMQEPVVPGCFLRARAIGLMPMIDQGEKDDKIIAVCADDPEYKHYTDFKELPPHRLTEIRRFFEDYKKNENKEVAVNEFLPASTALEAIQHSMDLYAEYILHTLRR 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00503 206 PANTHER INORGANIC PYROPHOSPHATASE 18 205 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Cca11g00503 206 Pfam Inorganic pyrophosphatase 46 196 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Cca11g00503 206 ProSitePatterns Inorganic pyrophosphatase signature. 92 98 - -
Cca11g00503 206 Hamap Inorganic pyrophosphatase [ppa]. 41 197 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Cca11g00503 206 CDD pyrophosphatase 46 194 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Cca11g00503 206 PANTHER BNAC07G03580D PROTEIN 18 205 - -
Cca11g00503 206 Gene3D Inorganic pyrophosphatase 31 202 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Cca11g00503 206 SUPERFAMILY Inorganic pyrophosphatase 29 202 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00503 Cca-Chr11 7096273 7098780 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00503 K01507 - gmx:100500365 377.481
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00503 11 7096273 7098780 Cca11g00503 11 7096273 7098780 ECH