Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00498 ATGGGGGGAAAGAGGAAGAAGAGCGATGGCGATGACGTGGAAGAAGCCGAAGAAGGTTCAAAGAAGAAAACAAGAACGTCGGCGGAGAAGAAGGAGCAATTGCTCCCTTCCATGATAAAGAACAAGGACAAGAGATCGGAGGTGCACGCCAAGCTCAAGCGCCAGAAGAAGCTCGACAAGCGCGCCAAGGCCAAGGCCAGGGACGCCGCTGCCAAGCGAGCTCTCGACCTCGGCGAGGAGCCTCCGGAGAAGAAGGTTCCTCGCACAATCGAGAACACCAGGGAATTCGACGAGACTGTTTGCAGGCCTGATGACGAAGAGTTATTTGCCGGAAACGATGCTGATGAATTCAGTTCAATTTTAAATCAGCAACAAACTCCCAAGATACTAATCACCACTTGCCGCTTCAACTCTACAAGGGGACCTGCTTTTATATCAGAGTTGCTTTCGGTTATACCAAATGCACACTACTACAAGAGAGGAACATATGATCTGAAAAAGATTGTTGAATATGCTAAGAATAAGCACTTCACTTCTGTTATAGTTGTTCACACCAATCGTAGGGAACCAGATGCTCTTTTAGTCATTGGCATACCTAATGGGCCTACTGCTCATTTTAAGCTCTCCAAGCTTGTTTTGCGCAAGGATATCAAGAATCATGGAACTCCAACGAGTCACAAACCTGAGCTTGTATTGAATAACTTCACAACACGTCTAGGGCATCGAGTTGGAAGGTTGATACAGTCACTTTTTCCACAAGATCCAGAACATAAAGGCCGACGAGTAGTCACCTTCCACAACCAGAGAGACTTCATATTCTTCCGGCATCATCGGTACATTTTTGAAACCAAAGAAGTTAAAAAGGCCGAGTCAAAAAGTAAAAAGGACAAAGATGGCAAGAGTGAGAATGTTCCTGAACAGAAAACAATTGCCCGTCTTCAGGAATGTGGCCCTCGTTTCACGCTAAAGTTGATTAGCCTGCAGCATGGGACATTTGATACTAAGGGTGGGGAATATGAATGGGTTCACAAGCCGGAAATGGACACAAGCCGAAGGAGGTTTTTCCTATGA 1071 0.4603 MGGKRKKSDGDDVEEAEEGSKKKTRTSAEKKEQLLPSMIKNKDKRSEVHAKLKRQKKLDKRAKAKARDAAAKRALDLGEEPPEKKVPRTIENTREFDETVCRPDDEELFAGNDADEFSSILNQQQTPKILITTCRFNSTRGPAFISELLSVIPNAHYYKRGTYDLKKIVEYAKNKHFTSVIVVHTNRREPDALLVIGIPNGPTAHFKLSKLVLRKDIKNHGTPTSHKPELVLNNFTTRLGHRVGRLIQSLFPQDPEHKGRRVVTFHNQRDFIFFRHHRYIFETKEVKKAESKSKKDKDGKSENVPEQKTIARLQECGPRFTLKLISLQHGTFDTKGGEYEWVHKPEMDTSRRRFFL 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00498 356 MobiDBLite consensus disorder prediction 290 309 - -
Cca11g00498 356 SUPERFAMILY Class II aaRS ABD-related 127 330 - -
Cca11g00498 356 Gene3D - 127 323 - -
Cca11g00498 356 PANTHER U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4 28 356 IPR044281 GO:0006364|GO:0042134
Cca11g00498 356 PANTHER RIBOSOME PRODUCTION FACTOR 1 28 356 - -
Cca11g00498 356 SMART Brix_2 130 327 IPR007109 GO:0006364|GO:0019843
Cca11g00498 356 MobiDBLite consensus disorder prediction 1 85 - -
Cca11g00498 356 Pfam Brix domain 139 325 IPR007109 GO:0006364|GO:0019843
Cca11g00498 356 MobiDBLite consensus disorder prediction 1 48 - -
Cca11g00498 356 ProSiteProfiles Brix domain profile. 127 333 IPR007109 GO:0006364|GO:0019843
Cca11g00498 356 MobiDBLite consensus disorder prediction 62 85 - -
Cca11g00498 356 MobiDBLite consensus disorder prediction 290 305 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00498 K14846 - gmx:100791194 594.349