Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00496 ATGGGCTCCCAAATTCCCAAAACAGTGATGATCTCAAGTAAAAGAAATGTTTTTGGCACCAAGGGGAAAAAGGGTCTAGATTTCCTCATGGTTTTGGTCTTAACAGTCTCATGGTTTTGTTTGATTACTACATGTGTTTCTGCTACAGAACCAGCGAGCCCACCAGCACAACTACAGAACCAAAAGCTAAGGTTTGACCAAAACGGAAAATTCAAGATATTGCAGGTGGCAGATATGCACTATGCCAATGGCAAGACCACACTTTGTTTGGATGTGCTCCCTTCCCAGAATATTTCTTGCTCTGACCTCAACACCACTGTCTTTCTTAACAGAATGATCAAAGCTGAGAAGCCTGATCTTATTGTCTTCACTGGAGATAATATCTTTGGGTTTGATTCCTCGGACTCAGCTAAATCAATGGATGCTGCATTTGCTCCTGCAATTGCATCAAATATTCCTTGGGTAGCTATTTTGGGCAACCATGACCAGGAAGGAACCCTCTCTAGGGAAGGAGTGATGAAATATATTGTTGGGATGAAAAACACCTTATCTAAATTCAACCCTCATGAAGTACATACGATTGATGGTTTTGGGAACTATAACTTGGAGGTTGGAGGAGTTAAAGGCACTCATTTCGAAAACAAATCAGTGCTCAACCTGTACTTTCTTGATAGTGGAGATTATTCCAAAGTTCCTACAATTTTTGGTTATGATTGGATCAAGCCCTCCCAGCAACTTTGGTTCCAAAGAACGTCTGCAAAACTTAGGAAAGCATACATTAGTGGACCAAAGCCTCAAAAAGAAGCTGCTCCTGGTCTTGCATATTTCCACATCCCTCTACCAGAATATGCTAGTTTTGACTCATCAAACTTCACAGGCGTGAAACTGGAACCAGATGGCAATGGCATTAGCTCTCCTTCTGTGAACTCTGGCTTCTTCACAACCTTGGTTGCAGCAGGAGATGTGAAGGCAGTTTTCACTGGCCATGACCACCTCAATGACTTCTGCGGAAATCTAATGAACATACAACTTTGTTATGCTGGGGGGTTCGGATACCATGCTTATGGAAAGGCAGGGTGGCCTAGGAGAGCAAGAGTGGTGGTAGCTAGCTTGAATAAAACGAGGGAAGGCAGTTGGGGAGATGTCAAGTCAATTAAAACATGGAAACGCCTTGATGATCAACATCTTTCCAGAATCGATGGCGAGGTCCTATGGAGCAAAAGCTCTGGTGGTAACCGTGGATAA 1245 0.4313 MGSQIPKTVMISSKRNVFGTKGKKGLDFLMVLVLTVSWFCLITTCVSATEPASPPAQLQNQKLRFDQNGKFKILQVADMHYANGKTTLCLDVLPSQNISCSDLNTTVFLNRMIKAEKPDLIVFTGDNIFGFDSSDSAKSMDAAFAPAIASNIPWVAILGNHDQEGTLSREGVMKYIVGMKNTLSKFNPHEVHTIDGFGNYNLEVGGVKGTHFENKSVLNLYFLDSGDYSKVPTIFGYDWIKPSQQLWFQRTSAKLRKAYISGPKPQKEAAPGLAYFHIPLPEYASFDSSNFTGVKLEPDGNGISSPSVNSGFFTTLVAAGDVKAVFTGHDHLNDFCGNLMNIQLCYAGGFGYHAYGKAGWPRRARVVVASLNKTREGSWGDVKSIKTWKRLDDQHLSRIDGEVLWSKSSGGNRG 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00496 414 Pfam Calcineurin-like phosphoesterase 71 332 IPR004843 GO:0016787
Cca11g00496 414 Gene3D - 70 377 IPR029052 -
Cca11g00496 414 PANTHER - 48 409 - -
Cca11g00496 414 PANTHER PHOSPHOESTERASE, METALLO-DEPENDENT PHOSPHATASE-LIKE PROTEIN-RELATED 48 409 - -
Cca11g00496 414 PIRSF Ptase_At2g46880 21 405 IPR011230 -
Cca11g00496 414 CDD MPP_Dcr2 69 356 - -
Cca11g00496 414 SUPERFAMILY Metallo-dependent phosphatases 69 380 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00496 Cca-Chr11 6921091 6924811 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00496 - - gmx:100794167 733.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00496 11 6921091 6924811 Cca11g00496 11 6921091 6924811 ECH