Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00495 ATGGCCAACGGTCGCAATTTGAAGAACGCTGTGATAGCATTCTTGGTTCCTCTTCCCTCCATCTTCTTCTACCTCTCATTCCTCAACAACTACGACTCATCAAATTCCCCATCATCGTTTTGGTCAACCTTATGGTCATGGTGCTATCACCACCCTCTTCTTTtagccaacgctctcttcttcctcaacgtcaatgtcctcttctggctcataggcctaatccaatccagccactggATGATCGACCCCTATTGGACTGTGATACCTGTGATGCTTGTTCACTACTATGCGACTCACCCTTTGGCTCACTGTGATTGGTGGAGGTCCAGGATCGTGATTTTGTTGACTTGGGTTTGGAGTGTTAGGCTCACTCACAACTACTTCAGGAGAGAGAGGTGGCAATGGGGTGCCAGGGAGGATTGGCGCTTCTCTGAGATGAGTCAGCAGTATGGAAGGCAATGGTGGTGGATTTCATTCTTTGCTGTCTATGTCTCCCAACAGATGTTTTTGATTGCATTGTCTCTTCCCTTGTATGCTGTCCATACTGTCAATCAGCCTTGGAACATATGGGACTTAGTGGCTACTGTTGTCTGTTTGTGTGGCATTGTGATAGCATACTTTGCTGATACACAGCTGTATGAGTTTGTGAGTAGAAACAACAAGCTGAAGGAACTTGGTAAACCTGTGATTCCTGTCCTTGACAGTGGCCTGTGGCATTACTGCCGGCATCCGAATTACTTTGGTGAGCAGCTGTGGTGGTGGGGGCTAGTTGTGTTTGCATGGAGCCTGGGACTTGGGTGGACCTTTATTGGAGCTTTGGTTAATACTATGTGTTTGGCCTATGTGACTAGGCTTGTGGAGGACCGAATGTTGAAACAAAAAAGTAGAGAAGAAGCATTTAGGGTTTATCAGAGGACAACTTCTGTGTGGGTACCTTGGTTCAAATCCTCTGCTTCAGGAGTTAAAAATAAGAATGCTTGA 981 0.4251 MANGRNLKNAVIAFLVPLPSIFFYLSFLNNYDSSNSPSSFWSTLWSWCYHHPLLLANALFFLNVNVLFWLIGLIQSSHWMIDPYWTVIPVMLVHYYATHPLAHCDWWRSRIVILLTWVWSVRLTHNYFRRERWQWGAREDWRFSEMSQQYGRQWWWISFFAVYVSQQMFLIALSLPLYAVHTVNQPWNIWDLVATVVCLCGIVIAYFADTQLYEFVSRNNKLKELGKPVIPVLDSGLWHYCRHPNYFGEQLWWWGLVVFAWSLGLGWTFIGALVNTMCLAYVTRLVEDRMLKQKSREEAFRVYQRTTSVWVPWFKSSASGVKNKNA 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00495 326 PANTHER 3-OXO-5-ALPHA-STEROID 4-DEHYDROGENASE 24 326 IPR010721 -
Cca11g00495 326 ProSiteProfiles Steroid 5-alpha reductase C-terminal domain profile. 194 263 IPR001104 GO:0006629|GO:0016627
Cca11g00495 326 PANTHER PHOSPHOLIPID METHYLTRANSFERASE 24 326 - -
Cca11g00495 326 Pfam Protein of unknown function (DUF1295) 68 307 IPR010721 -
Cca11g00495 326 Gene3D - 107 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00495 Cca-Chr11 6909600 6911900 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00495 - - gmx:100783556 639.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00495 11 6909600 6911900 Cca11g00495 11 6909600 6911900 ECH