Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00494 ATGTCGGCGCGATTGATGAAGAAGGTTCTGAACGAGCAACACCACCTTCCCCAACACGTGAGCGAAGAAGAAGAAGAGAACGATTCCGAGTCAATCACTCGTTCCTCCATCAACCTCTTTGACCTCCTCAACGACCACGATTCTGAGCCCGAGAACCAGGGAGATGAGTTGATGTCCACGGAGGAAACGTTGGCTAGAAACAATGATAAAGAGGAGTCATCTTGGTCGAAACCTATTTCTGGGGTTTCCACGTCCAGTCTGAAATCAaagaaaaaaaagaagaagaaaaacaagGATAGTGCCGTTGCCAATAAAACAGAAGGTGAAAAAGAATTGGACTTGATTCTGGAAGGTTTATCTCTGAATGTCAACTCTGCGTCCGAGCAGCCTATTTCTACCAAAGACAAAAATAAATCTGCTAAACTGCACACAGCCTCTATATTGCAAGTGGATCCTAAGTATTTGAATGCTGAAAATGAGCTGAGAAGGATATTTGGATCCAAGGTTGTGAAATCATTTGAGAGTAGCAGTCAAGCGAGCAGTTCTAGGCAGATGCGAGGGAGTGTTCTTGTCACTCCATCAGACAATTGGCTCCGCTGTGAGGATTCTTTGTCTATGCAATTTTTGGAAATAAAAAATGGATATAACTACTTTAGATATGTACACTCGCCTTCCTACTCCCAAACTCAGAGAGCATTTGAAGCTGCCAAAGCAATTAATGACATAAATGGCATAGCAAGCATATTACAGCACCGTCCTTATCATATAGATTCCCTTCTAACAATGGCCGAATATTTCGCAGTATTGGGTGAACAACAGATGTCTGCAGATGCTATTGCCAGGTGTCTATATGCCCTTGAATGTGCATGGCATCCCATGTTCAATCCACTGCAGGGAAATTGCCAGTTGAAGTTCAGACATGATACAAACAAACCTATATTCACAGCTCTTTTCACTCACATGAACAATTTGGACAGGCGTGGCTGTCATAGATCTGCCTTGGAGGTCTGCAAATTGTTGCTTTCGCTAGATTCTGATGATCCCATGGGGGCTATTTTCTGTATTGACTACTTTGCTTTAAGGGCTGAGGAGTATGCATGGCTGGAAAAGTTTTCTGAAGAATATAAAAGTGATAACTCCATTTGGTTGTTTCCAAACTTCTCTTATTCCCTTGCCATTTGTCGGTTTTACCTTGAGCGTGAGGCCTGCAAAGATGCTAGTATGAATGCTGAAAAGGCTTCTTCGTCTGATCTTATGAAACAAGCATTGATGCTTCATCCTTCAGTCATAAAGAAGCTAGTGGCAAAAGTACCATTGAAAGATCGCACATGGACAGATATTCTCAAGCATGCATTTTTCCGGTCAGATCAAACAGGAATTCCATCACAAGATCACTTGATTAATATATATGTTGAAAGAAATTATCTTATATGGAGGCTTCCTGATCTACAAAAACTGCTAAGTGGTGCTGCAAAACTAGTGATTGAAACACTAGAAAATAATAAAAGTGAAGTTAAGGATTGGGCTTGTGTCAGAAAAGAAGCGTTTTCATCTGAGAAAAATGAGTATGGACATTTGTTGGTATCTGATTTCTCTGATTCACATTCATCAATTCCACGAGAAAATCTGCAACAATTTATGGGTGTTCCAAGGATGATGGAGGGTGTGCAGGATGAGAACCAATTTGCTAATCTACCTGGCAATGGCCATGCTCCTCGTGGTGTTGCAAATAGAAATGCATTAGCTGTCTTGTTCGAGTCAATGCTACCATGGGTTACTTATGAGGATAGGGAGGATGGTGGACCTGATGATGGTAACCAACATGATGACCACAGGCAGGACAATCAATGA 1851 0.4122 MSARLMKKVLNEQHHLPQHVSEEEEENDSESITRSSINLFDLLNDHDSEPENQGDELMSTEETLARNNDKEESSWSKPISGVSTSSLKSKKKKKKKNKDSAVANKTEGEKELDLILEGLSLNVNSASEQPISTKDKNKSAKLHTASILQVDPKYLNAENELRRIFGSKVVKSFESSSQASSSRQMRGSVLVTPSDNWLRCEDSLSMQFLEIKNGYNYFRYVHSPSYSQTQRAFEAAKAINDINGIASILQHRPYHIDSLLTMAEYFAVLGEQQMSADAIARCLYALECAWHPMFNPLQGNCQLKFRHDTNKPIFTALFTHMNNLDRRGCHRSALEVCKLLLSLDSDDPMGAIFCIDYFALRAEEYAWLEKFSEEYKSDNSIWLFPNFSYSLAICRFYLEREACKDASMNAEKASSSDLMKQALMLHPSVIKKLVAKVPLKDRTWTDILKHAFFRSDQTGIPSQDHLINIYVERNYLIWRLPDLQKLLSGAAKLVIETLENNKSEVKDWACVRKEAFSSEKNEYGHLLVSDFSDSHSSIPRENLQQFMGVPRMMEGVQDENQFANLPGNGHAPRGVANRNALAVLFESMLPWVTYEDREDGGPDDGNQHDDHRQDNQ 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00494 616 MobiDBLite consensus disorder prediction 1 105 - -
Cca11g00494 616 PANTHER NULP1-RELATED 1 612 IPR006994 -
Cca11g00494 616 MobiDBLite consensus disorder prediction 8 22 - -
Cca11g00494 616 Pfam Transcriptional repressor TCF25 218 541 IPR006994 -
Cca11g00494 616 MobiDBLite consensus disorder prediction 594 616 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00494 K24970 - gmx:100782875 1080.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00494 11 6900938 6905426 Cca11g00494 11 6900938 6905426 ECH