Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00482 ATGAATCAAATGATGAAATCTCCATCACAACCAACATTTGAGGCATGCCATTATCATGACTATGGATTTTATCTGCAACAAGACTTTTGCCTGTTCTTGGAGGAAGCAAAGCAACATGGAAAGGAAGCAAAGCTGAAGAGTTCATCAGTGTACCCTGAAGAATCTGGTAAAGCTGGATCAAAGGAAGAGAAAAAGGGGAAGAAGTCATGGAAAAGTTCTCTGACTTCATGGTGGAAATCTGACAAGAAAAGCGGCAAGCATAGTGAAAACCCCACCAACAATTCTAAGCCAAAGGGTTCTGTGAAAAGGCATGGTCATTCTTCTGGTCCAATGTATAACTCCTGCAATAGTTCTGATGGTAAACACTGGCGTCCAACATCTGGTCCTCTTGTGAGTCTTTTCAAACCCTCAAAGAGAGAGGAAAATGATATACCTTATATCTCTCTCCACCAACAAAATAGCCCTCCTACTGGAAAGAACTATGGCCCTCTTTATGTGGTCACTTGA 507 0.4162 MNQMMKSPSQPTFEACHYHDYGFYLQQDFCLFLEEAKQHGKEAKLKSSSVYPEESGKAGSKEEKKGKKSWKSSLTSWWKSDKKSGKHSENPTNNSKPKGSVKRHGHSSGPMYNSCNSSDGKHWRPTSGPLVSLFKPSKREENDIPYISLHQQNSPPTGKNYGPLYVVT 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00482 168 MobiDBLite consensus disorder prediction 41 168 - -
Cca11g00482 168 PANTHER OS05G0358900 PROTEIN-RELATED 4 168 - -
Cca11g00482 168 MobiDBLite consensus disorder prediction 56 70 - -
Cca11g00482 168 MobiDBLite consensus disorder prediction 107 123 - -
Cca11g00482 168 PANTHER - 4 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00482 Cca-Chr11 6754468 6755940 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00482 - - gmx:100778726 224.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00482 11 6754468 6755940 Cca11g00482 11 6754468 6755940 ECH