Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00479 ATGAGAGAGCCCAGAGATGGAGCCACCAAGCCCTCCAAAACGGCGTCGTCGCCGGCTCCCTCCTTCCCTCTCATTCTCGACATCGACGATTTCAAGGGAGACTTCTCCTTCGACGCGTTGTTCGGGAACCTCGTGGGCGAGCTTCTTCCGTCCTTCAAATTGGAAGATGCGGAGTTGGACGGCGCCGATGCGCTGCCCAACGGCCATATGCGAGCGCCCTCCGATGCGTCCAAATACTCGCAGGTGCTCGTGAGTCCGTTGTTCCCCGAGGTCGAGAAGCTCTTGTCGTTGTTCAAGGATTCTTGTAAGGAGCTGCTTGAGCTTCGTAAACAGATTGATGGGAGACTCTACAATCTTAAGAAAGACGTCTCCGTTCAAGACTCTAAGCATCGAAAGACACTTGCTGAGCTAGAGAAAGGTGTGGATGGATTGTTTGATAGCTTTGCGAGGTTGGATTCACGAATTTCTAGTGTTGGCCAGACAGCTGCAAAGATAGGTGATCATCTTCAGAGTGCAGATGCTCAGCGTGAAACTGCCAGTCAAACAATTGAGTTGATAAAATACTTAATGGAGTTCAATAGCAGCCCTGGTGATCTGATGGAGCTTTCACCTCTTTTTTCGGATGATAGCCGTGTTGCCGAGGCTGCTTCAATTGCCCAGAAATTACGGTCATTTGCTGAAGAAGATATTGGAAGACATGGAATACCTGTCCCATCAGCTATGGGAAATGCCACTGCTAGCAGAGGATTAGAAGTTGCAGTTGCTAATTTACAGGACTACTGCAATGAACTGGAGAATAGATTGCTTTCTCGGTTTGATGCAGCATCACAGAAAAGAGAATTGACCACTATGGCAGAATGTGCCAAAATTTTGTCTCAGTTCAACAGGGGTACAAGTGCCATGCAACATTATGTTGCAACACGTCCAATGTTCATTGATGTGGAAATAATGAATGCAGACACTAAGCTGGTTCTTGGTGATCAGGCTGCTCAAGCTAGTCCTAGTAATGTTGCACGAGGACTTTCTTCCTTGTACAAAGAAATTACAGATACTGTACGTAAAGAGGCTGCAACAATCACGGCTGTTTTCCCTTCACCAAGTGAAGTTATGTCAATTTTAGTTCAGCGAGTTTTAGAGCAGCGAATCACTGCCCTTCTGGACAAACTGTTAGAAAAACCATCTCTTGTCAATTTACCTTCCATGGAGGAAGGTGGGCTCCTATTATATCTTCGAATGCTGGCAGTGGCATATGAAAAGACCCGCGAACTTGCAAGAGATCTACAAGCTGTGGGATGTGGTGACTTGGATGTTGAGGGTCTAACAGAGTCCCTATTTTCAAGTCACAAGGATGAATACCCTGAATATGAACAGGCATCTCTTACGCAATTATATAAAATGAAGATGGAAGAATTGCGAGCTGAAAATCAGCAACAGATTTCTGATTCATCAGGGTCAATTGGACGTGCAAAAGGAGCTTCAGTAGTTTCATCTCAACAGCAAATATCTGTTACTGTTGTGACAGAGTTTGTGCGTTGGAATGAAGAAGCAATCTCAAGATGCAATCTCTTTGCTTCTCAGCCAGCTACACTTGCAACCCATGTAAAAGCTGTGTTTACTTGCCTTCTAGACCAAGTTAGTCAATATATAGCAGATGGGCTTGAACGGGCTAGAGACAGCCTGACTGAAGCAGCTAATTTGAGGGAAAGATTTGTGCTGGGTACAAGTGTTACCCGTAGAGTGGCTGCTGCAGCTGCATCTGCTGCAGAGGCAGCGGCAGCTGCTGGTGAAAGTAGTTTCAGATCTTTCATGATTGCTGTACAGCGTTCTGGAAGCAGTGTAGCTATTATTCAACAATACTTTGCTAATTCTATATCTCGGCTTTTGCTCCCTGTGGATGGTGCACATGCTGCTGCTTGTGAGGAAATGGCTCAAGCAATGTCAAGTGCAGAAGCTGCTGCTTATAAAGGATTACAGCAGTGCATTGAAACTGTCATGGCAGAGGTGGAGCGGTTGCTTTCAGCTGAACAAAAGGCTACAGATTATCGATCACCTGATGATGGAATGGCTCCTGACCACCGGGCAACCAGTGCCTGCACAAGAGTTGTTGCTTATCTTTCTCGTGTTCTGGAGTCTGCCTTTACTGCTCTAGAAGGCCTTAACAAACAAGCATTCCTGACTGAGTTGGGGAATCGCTTGCACAAGGTGCTATTAAACCATTGGCAGAAGTATACTTTTAATCCAAGTGGGGGATTACGACTGAAGCGTGACATTACTGAATATGGAGAATATCTGCGAAGTTTCAATGCTCCTTCTGTTGATGAAAAGTTTGAATTGTTGGGCATAATGGCCAATGTATTTATTGTTGCTCCCGAGAGTCTTGCTACTTTGTTCGAGGGCACACCTAGCATACGGAAAGATGCACAAAGATTTATTCAACTGCGGGATGACTACAAGGCTGCTAAACTTGCGTCCAAACTGAGTTCCTTGTGGTCTTAA 2496 0.4559 MREPRDGATKPSKTASSPAPSFPLILDIDDFKGDFSFDALFGNLVGELLPSFKLEDAELDGADALPNGHMRAPSDASKYSQVLVSPLFPEVEKLLSLFKDSCKELLELRKQIDGRLYNLKKDVSVQDSKHRKTLAELEKGVDGLFDSFARLDSRISSVGQTAAKIGDHLQSADAQRETASQTIELIKYLMEFNSSPGDLMELSPLFSDDSRVAEAASIAQKLRSFAEEDIGRHGIPVPSAMGNATASRGLEVAVANLQDYCNELENRLLSRFDAASQKRELTTMAECAKILSQFNRGTSAMQHYVATRPMFIDVEIMNADTKLVLGDQAAQASPSNVARGLSSLYKEITDTVRKEAATITAVFPSPSEVMSILVQRVLEQRITALLDKLLEKPSLVNLPSMEEGGLLLYLRMLAVAYEKTRELARDLQAVGCGDLDVEGLTESLFSSHKDEYPEYEQASLTQLYKMKMEELRAENQQQISDSSGSIGRAKGASVVSSQQQISVTVVTEFVRWNEEAISRCNLFASQPATLATHVKAVFTCLLDQVSQYIADGLERARDSLTEAANLRERFVLGTSVTRRVAAAAASAAEAAAAAGESSFRSFMIAVQRSGSSVAIIQQYFANSISRLLLPVDGAHAAACEEMAQAMSSAEAAAYKGLQQCIETVMAEVERLLSAEQKATDYRSPDDGMAPDHRATSACTRVVAYLSRVLESAFTALEGLNKQAFLTELGNRLHKVLLNHWQKYTFNPSGGLRLKRDITEYGEYLRSFNAPSVDEKFELLGIMANVFIVAPESLATLFEGTPSIRKDAQRFIQLRDDYKAAKLASKLSSLWS 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00479 831 Coils Coil 247 267 - -
Cca11g00479 831 Gene3D - 664 825 - -
Cca11g00479 831 PANTHER SEC10 21 830 IPR009976 GO:0005737|GO:0006887
Cca11g00479 831 Pfam Exocyst complex component Sec10 496 825 IPR009976 GO:0005737|GO:0006887
Cca11g00479 831 Pfam Exocyst complex component Sec10 142 483 IPR009976 GO:0005737|GO:0006887
Cca11g00479 831 PANTHER EXOCYST COMPLEX COMPONENT SEC10-LIKE PROTEIN-RELATED 21 830 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00479 K19984 - gmx:100820430 1451.42