Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00468 ATGCTTCCAAAGTTCATAAGCCCCTTCAAGGTGGAATCCCATGAAGGGAAGCATGTGAGCAAAAGAAGGAAGCATGTGAGATCATTTGAGAGTACCAACATGGATGTTGGTTTGAGACTTCTCCCTCAAATTACAACCTCAAAGAGCACATCCAATGTCCTCTTGAAATCTGCAATGAGAAAGACAAACCAATCCATACCTCAGGACTTTTGCTTCCTTAAAACTTGCAATCTATGCAATAAGCAGCTCAGCCCAGACAAAGATATTTACATGTACAGGGGTGATCAAGGTTTCTGCAGTGTAGAGTGTCGGAACAGACAAATAGTTTTGGATGAGATGAGAGAATTAGAGAGTTCTACCAAGCAAATGGTAGCAGCTTATGGGCAATGTTGTAGTGAGGCTCGACGAGAGACTCGTCTTATACTTGAGGATCTTCGAATGCAGAGACTCAAATCGAAAGTCTGA 465 0.4237 MLPKFISPFKVESHEGKHVSKRRKHVRSFESTNMDVGLRLLPQITTSKSTSNVLLKSAMRKTNQSIPQDFCFLKTCNLCNKQLSPDKDIYMYRGDQGFCSVECRNRQIVLDEMRELESSTKQMVAAYGQCCSEARRETRLILEDLRMQRLKSKV 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00468 154 PANTHER FCS-LIKE ZINC FINGER 17 1 152 - -
Cca11g00468 154 Pfam zinc-finger of the FCS-type, C2-C2 70 113 IPR007650 -
Cca11g00468 154 PANTHER FCS-LIKE ZINC FINGER 17 1 152 IPR044181 -
Cca11g00468 154 ProSiteProfiles Zinc finger FLZ-type profile. 71 115 IPR007650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00468 Cca-Chr11 6484002 6485440 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00468 - - gmx:100816015 280.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00468 11 6484002 6485440 Cca11g00468 11 6484002 6485440 ECH