Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00460 ATGAAGTCCACGTTGGCAAATCTATCAAGCTCTATGTTCTTCCTTGTGTTCCTCATAGCTTTTGTGTCTCGTAATCACGGAACCAAAATCAACCACAGAAGCAGCAAGCATGTTGCCCTCTTCATTTTTGGCGATTCTTTCTTAGATGCTGGCAATAACAATTACATCAATACTACAGCTCTTGACCAAGCAAATTTCTGGCCCTATGGGGAAACATACTTCAACTTCCCAACAGGAAGATTCTCTGATGGAAGGTTGATATCAGATTTCATAGCTGAATACGCAAACCTGCCATTGGTTCCACCATATCTACAACCTGGCATTAACCAATACTATGGTGGAGTGAATTTTGCATCTGGTGGAGCAGGTGCTCTTGTTGAAACTTTTGAAGGGTCGGTAATACCCTTCAAAACACAAGCAAGAAACTTCAAGAAAGTAACGGCTTGGTTGAGGCACAAGTTAGGGAGTTCTGAAGCAAAATTATTGTTATCAAAGGCTGTCTATATGTTCAGCATCGGAACCAACGATTACCTTAGCCCGTTCTTGACAGATTCTCTTGTTCTTAACTCTTACTCTCATTCAGAATATGTTGGTATGGTTGTTGGAAACTTCACTTCCATTATCAAGGAAATATACAAGAGAGGGGCTAGAAAATTTGTGTTCATGACCTTGCCACCCTTGGGTTGTCTTCCAGGCACTAAAATAATCCAATCAAAGGGAAATGGTAAATGCTTACAAGAACTTTCAGACCTTGCAAATTTACACAATCGAGTTCTATCTGTGGTTCTCTTACAACTGGAGAAACGATTGAAGGACTTTAAATTTGCTCTATACGATTTCAACACTGATCTCACTCAGATGATAAATCATCCCTTGAAATATGGGTTGAAGGAGGGAAAAATAGCATGTTGTGGAAGTGGACCATTGAGAGGAGTGTATAGCTGCGGAGGAAAAAGAGGGGAGAAGCATTTTGAATTATGTGACAAACCCAATGAATATTTGTTTTGGGACTCTTATCATCTTACAGAAAGTGCTTACAAAATATTAGCAGATCGAATGTGGGGCTATACCAACAACTCTTACAATATAGGGCCTTACACTATTAAAGATCTCTTCCAACTCCCATGA 1128 0.398 MKSTLANLSSSMFFLVFLIAFVSRNHGTKINHRSSKHVALFIFGDSFLDAGNNNYINTTALDQANFWPYGETYFNFPTGRFSDGRLISDFIAEYANLPLVPPYLQPGINQYYGGVNFASGGAGALVETFEGSVIPFKTQARNFKKVTAWLRHKLGSSEAKLLLSKAVYMFSIGTNDYLSPFLTDSLVLNSYSHSEYVGMVVGNFTSIIKEIYKRGARKFVFMTLPPLGCLPGTKIIQSKGNGKCLQELSDLANLHNRVLSVVLLQLEKRLKDFKFALYDFNTDLTQMINHPLKYGLKEGKIACCGSGPLRGVYSCGGKRGEKHFELCDKPNEYLFWDSYHLTESAYKILADRMWGYTNNSYNIGPYTIKDLFQLP 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00460 375 Pfam GDSL-like Lipase/Acylhydrolase 40 352 IPR001087 GO:0016788
Cca11g00460 375 Gene3D SGNH hydrolase 25 363 IPR036514 -
Cca11g00460 375 SUPERFAMILY SGNH hydrolase 40 357 - -
Cca11g00460 375 CDD SGNH_plant_lipase_like 39 354 IPR035669 -
Cca11g00460 375 PANTHER GDSL ESTERASE/LIPASE 5 10 373 - -
Cca11g00460 375 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 10 373 IPR044552 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00460 Cca-Chr11 6346756 6351734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00460 39 354 Acyl Lipid Metabolism Gene Families AT4G10950 32.508 5.75e-48 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00460 - - gmx:100819379 655.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00460 11 6346756 6351734 Cca11g00460 11 6346756 6351734 ECH