Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00454 ATGCTTAGTCTTCAAAGGAACTTATCTGATCATAATACTACAGGACAATCACTTTATGAAACACTTTTTGTTTGGAATGAGTTCTTAACTCGTGGAATCAGGAATAATCTCCAGAATACTTCCTGGACTGTAGCCTTAGTGTATGGCTTTTTTAAACAGGTCAAACTTTCTATATCTGACAGTGAGTTCAACTTGACTATCATTGCTAGGCGCTCACGGCATTATGCTGGGACCAGATATTTGAAACGAGGAGTGAATGAAAAAGGTAGAGTAGCCAATGACGTTGAGACAGAGCAGATAGTCTTTACAGATGCTCATGATGGACGCCCAATGCAAATCAGTTCAGTGGTACAGATCCGGGGTTCCATCCCTCTGTTCTGGTCTCAGGAAGCCTCTAGATTGAATATAAAACCTGACATTATATTATCAAGGAAGGACTCTAATTTTGAAGCCACAAGACTTCATTTTGAAAATCTTGTGAAGAGATATGGAAATCCAATTATTATACTGAACTTGATAAAGACACGTGAGAAGAAGCCTCGAGAAACTATTCTGCGATCTGAGTTTGCGAATGCTGTTAGGTCTATTAATAAAAATTTGAGAGGGGAAAATCGCCTGAGGTTTCTTCATTGGGATCTGCATCGGCATTCAAGATGCAGCAAAGCTACTAATGTGTTGGGACAACTGGGGAAAGTGGCTGCGTATGCGCTGAAGCTGACTGGCATCTTCTACTGTCCAGTGACACCAAATTTGAGGCTAGATGGATTATGTGAATATTCCTACTCTGAGAATGACAATGTCATTGATCACTGCATCACAGAACAAACATGCATAAACAAGGATAATGTTGATAAAGAAACAGAAATTAGCAATTGTTACTGTAGTGGTGATGAGAACAAAGATTACAGCGTCAAACCCCAGATGCTTCAATCTGGGGTCTTGAGGACTAATTGCATAGACTGTTTAGATCGTACCAATGTTGCTCAATATGCTTATGGACTAGCTGCACTTGGATGCCAGCTACAAGTTTTAGGATTTACTGAATCCCCATATATTGATCTTGATAACCCTTTGGCCAAGGAATTAATGCAAGTCTATGAGTCCATGGGCGATACACTAGCCTTTCAATATGGGGGATCTGCAGCACACAACAAGATATTTTCTGAGAAAAGAGGTCAATGGAAGGCAGCAACACAATCCCAGGAGTTTATTCGAACTCTACAGCGTTATTACAACAACACGTATTTAGATGTTGATAAGCAAAAAGCAATTAACTTATTCTTGGGGCATTTTCAGCCACAACAGGGAAAACCAGCACTGTGGGAGTTAGATTCAGATCAGCATTACACCATCAGGAAACTTGGGCTGTATTTTGCAGATGACAATATTAGGTCATCTATGAAAAGATCGCTATCAGATGGTAACATTATCAGTGAAAGTGACAATACAATTAGGAACTTGAATGTTACAAATTGTCAGCACTTATCTGAAAAACCTGATAAGCGTTTTCTTTCGGGGTCTACTCCAGACATCTTTACTTGTGGAAGCGACATTTGTCATTGCAGGCAGATATACGAAGGAATGGTCAAGGGCCAAAATTGTGAGAGTGATCATATTTGTTACGATGAACATGGAGATGCATGTGACTGCTCCAATTTCCTTGATGTGGACTGGCTTTCTTCTTCTGGAAATTCTTGTGAAGAAGAATTACTTGAAAGGTCAACCAGCATCTCCTCGGAGAATATTGCAAATGAACTAGTAACTGAGACATCTGCAAGTGATTCTGGATCCAGCATTAAGGGAAGGCAGAGTGGAGATGGAGAACTGAACAAGGATAGCAATAGCAAATACAGTGAAAGCTTTGAACGTTGGGTAACTCAAGGGGAGATGCTTTTTGTTTGA 1902 0.4012 MLSLQRNLSDHNTTGQSLYETLFVWNEFLTRGIRNNLQNTSWTVALVYGFFKQVKLSISDSEFNLTIIARRSRHYAGTRYLKRGVNEKGRVANDVETEQIVFTDAHDGRPMQISSVVQIRGSIPLFWSQEASRLNIKPDIILSRKDSNFEATRLHFENLVKRYGNPIIILNLIKTREKKPRETILRSEFANAVRSINKNLRGENRLRFLHWDLHRHSRCSKATNVLGQLGKVAAYALKLTGIFYCPVTPNLRLDGLCEYSYSENDNVIDHCITEQTCINKDNVDKETEISNCYCSGDENKDYSVKPQMLQSGVLRTNCIDCLDRTNVAQYAYGLAALGCQLQVLGFTESPYIDLDNPLAKELMQVYESMGDTLAFQYGGSAAHNKIFSEKRGQWKAATQSQEFIRTLQRYYNNTYLDVDKQKAINLFLGHFQPQQGKPALWELDSDQHYTIRKLGLYFADDNIRSSMKRSLSDGNIISESDNTIRNLNVTNCQHLSEKPDKRFLSGSTPDIFTCGSDICHCRQIYEGMVKGQNCESDHICYDEHGDACDCSNFLDVDWLSSSGNSCEEELLERSTSISSENIANELVTETSASDSGSSIKGRQSGDGELNKDSNSKYSESFERWVTQGEMLFV 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00454 633 PANTHER POLYPHOSPHOINOSITIDE PHOSPHATASE 1 633 IPR043573 GO:0043813|GO:0046856
Cca11g00454 633 PANTHER PHOSPHOINOSITIDE PHOSPHATASE SAC4 1 633 - -
Cca11g00454 633 MobiDBLite consensus disorder prediction 588 604 - -
Cca11g00454 633 Pfam SacI homology domain 3 217 IPR002013 GO:0016791
Cca11g00454 633 ProSiteProfiles Sac phosphatase domain profile. 1 379 IPR002013 GO:0016791
Cca11g00454 633 MobiDBLite consensus disorder prediction 588 618 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00454 Cca-Chr11 6218461 6231506 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00454 1 625 Acyl Lipid Metabolism Gene Families AT3G14205 58.998 0.0 682
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00454 K22913 - gmx:100796788 1167.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00454 11 6218461 6231506 Cca11g00454 11 6218461 6231506 ECH