Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00452 ATGGTGAAATCCAAATCCAATTCCAATTCCAATAAGTCAAAGAAACCGGAGGACGTTGAGCTTATCAAATCCGACGTCGCCGCCTTCGCCTCCTTGATCGGGCTTTCAAATTCACAACCCGATTCTGGTTTCAACGATGTCGATTTTCGCAGTGCGAAGCCAAACAAGCCCCCAAAGAAGCACCAAACACCTGAACAAGTTGTGCCCCAAAGTTCCCAGAATCCAAAGAACAAGACTTTGGGCAAAAACAATGGACCCCAcgacaagcgcaaccccaaacccgaaccgaaaccgaaaccCCCTGTGCTGTCACTGGAGAATGATTCCAACAAGGAAAAGGGGTTCAACAAGTTCAGGAACCTTCCCAAGCTTCCTTTGATGAAGGCAAATGGCTTGGGAGTGTGGTTTGAGGACATGGCTGAGTTGGAAGGGAAGGTGGTGGGGGAAGGGAAGAAGGTGGAGGTAAAGAATGTGGGAGAATGGAAAGGGTTTGTGGAGAAGAAGAGGGAACTAGGGGAGAGGTTGATGGCACAGTATGCTCTTGATTATGAGTCATCAAGGGGGCAGAGCAGTGATATTAAGATGTTGGTTTCAACACAGAGGTCAGGAACTGCTGCTGATAAAGTTTCTGCTTTTTCTGTGTTGGTGGGGGATAATCCAATTGCTAACTTGCGTTCTCTTGATGCTCTTTTGGGAATGGTGACATCCAAGGTTGGAAAGCGCCATGCCTTGACAGGATTTGAAGCACTGCAAGAATTATTTATTGCAAGCTTATTACCAGATCGTAAATTGAAGACCTTGATACAGCGGCCCCTAAATCATATTCCTGACACTAAAGATGGTTACTCCCTTCTCCTTTTCTGGTATTGGGAGGAATGTTTGAAGCAGAGATATGAACGGTTTGTTGTTGCACTTGAAGAAGCATCACGAGACATGCTACCCGCTCTAAAAACCAAGGCATTAAAGGCCATATATGTGCTATTGAGCCGGAAGTCAGAGCAAGAATGCAGACTACTTTCCGCACTGGTTAATAAACTTGGGGATCCAGATAATAAGGCAGCATCTAATGCTGACTATCACTTGTCCAACCTTTTGTCTGACCACCCAAACATGAAGGCTGTGGTTATTGACGAGGTGGATTCTTTTCTATTTCGGCCTCATTTAGGACCACGTTCACAGTACCATGCTATTAACTTCTTAAGCCAAATCCGTCACACAAATAAAGGAGAAGGGCCAAAAGTGGCAAAACGTCTTATAGATGTATATTTTGCATTGTTTAAGGTTTTAATTACTGGTGCAAGCAGCAATCAGAAGAAGTTTGATAAAAGCGGCAAGGCAAACCCAAAAGAAGAAAAATCAAAAGAGTTATCAGAATCACCTGTGGAATTGGATTCTCGGCTTCTATCAGCTCTCTTAACTGGAGTGAATAGAGCATTTCCTTTTGTCTCAAGTAATGAAGCTGATGACATTGTTGATGTTCAAACACCAGTACTTTTCCAATTGGTTCATTCAAAGAATTTTAATGTAGGGGTTCAAGCACTGATGCTTCTTGATAAAATTTCATCCAAAAATCAGATAGCTAGTGATCGGTATTACCGTGCATTGTACTCCAAACTTTTACTTCCGGCTGCCATGAATACTTCCAAGGCAAGCAAACTCCTCTTACAAATGTTTATTGCACTTCTTCTGAGAGCAATGAAAAGGGATGTTAATTTAAAGCGTGTGGCTGCATTTTCCAAACGTCTATTGCAGATTGCACTACAGCAGCCACCACAATATGGATGTGCATGCCTATTCCTTCTTTCTGAACTCCTTAAAGCCAGACCACCTTTATGGAACGTGGTATTGCAGAACGAGGCTGTTGACGAGGAACTTGAACACTTTGAAGATGTTATAGAAACTGACAATGCACCTAGCACTGTATCAAATAAACAAAACAATGATGTTGAAGTTGTTCACAATGGTGAGGATGCCAATGCTAACACCAGCTCTTCGGAAAGTGAAGATGATCTTCCTGCATCTTCtgaagatgatgatgattcagatgatggtgCTTCAGAGGATGGGTTTTTTTTGCTTGAAAAAAATGAAACTGATCATAAGAAATCAAAATCTGTATCTGATAATGAAGGCCATCAGTCACAATTATCGGCCAAAAAGTCTACCCTGCCTGGAGGTTATGATCCACGACTCAGAGAGCCTTCTTACTGCAATGCAGACCGTGTAAGTTGGTGGGAGTTAATGGTGCTTGCCTCACATGCACACCCTTCAGTTGCTACTATGGCCAGAACTCTTCTTTCTGGGGCCAACATTGTCTATAATGGAAATCCTTTGAATGACCTCTCTCTGACGGCTTTCCTAGACAAATTCATGGAGAAGAAACCAAAACAAAGCACATGGCATGGTGGTTCTCAGATTGAACCTGCCAAGCAGATGGATGTTAACAACCAATTGATTGGGGCAGAAATTCTTTCACTAGCCGAGGCAGATGTACCTCCAGAGGACCTTGTATTCCACAAGTTCTACACAAACAAAATGAGTTCCACTTCTAAGCCAAAGAAAAAGAAAAAGAAGTCAGCTGATGAAGAGGCAGCTGAGGAGTTGTTtgatattgatgatgatggcgaggttgatggtggtgatgagagtgatAATGAAGAGATTGAGAATCTGTTGGATTCTGCCGATCCATCTTTGGGGGCAGATAGTGACTATGATTATGATGATTTGGATAAAGTAGCTGATGAGGAAGATGAGGACTTGATTGGTGATGATTATGATGCAGAGATAGATATACCCTCTGATATGGAAGAGGATGAGGCTGATGTTCCAATTGATGATGATGTTGTTGGAAGTGATGACGATGACATTGAGGTTGGAGATTTTGATGATGCCTCTGATGGTGATGTGGAGGAAGTTGTCAAAAGAAAACGAAAACATAAAAGTGGTGGTAAGAGTGGTGTGTCTCCATTTGCAAGCTATGAAGAGTTTGAGCATCTAATGGAAGATGATGACCATACTGATAAAAAACCTACCAAAAAAAACAAGTCTGATAATGAACCTACCAAGAAAAACAAGTCTAAGAAAAGAAAAAAGTAA 3099 0.405 MVKSKSNSNSNKSKKPEDVELIKSDVAAFASLIGLSNSQPDSGFNDVDFRSAKPNKPPKKHQTPEQVVPQSSQNPKNKTLGKNNGPHDKRNPKPEPKPKPPVLSLENDSNKEKGFNKFRNLPKLPLMKANGLGVWFEDMAELEGKVVGEGKKVEVKNVGEWKGFVEKKRELGERLMAQYALDYESSRGQSSDIKMLVSTQRSGTAADKVSAFSVLVGDNPIANLRSLDALLGMVTSKVGKRHALTGFEALQELFIASLLPDRKLKTLIQRPLNHIPDTKDGYSLLLFWYWEECLKQRYERFVVALEEASRDMLPALKTKALKAIYVLLSRKSEQECRLLSALVNKLGDPDNKAASNADYHLSNLLSDHPNMKAVVIDEVDSFLFRPHLGPRSQYHAINFLSQIRHTNKGEGPKVAKRLIDVYFALFKVLITGASSNQKKFDKSGKANPKEEKSKELSESPVELDSRLLSALLTGVNRAFPFVSSNEADDIVDVQTPVLFQLVHSKNFNVGVQALMLLDKISSKNQIASDRYYRALYSKLLLPAAMNTSKASKLLLQMFIALLLRAMKRDVNLKRVAAFSKRLLQIALQQPPQYGCACLFLLSELLKARPPLWNVVLQNEAVDEELEHFEDVIETDNAPSTVSNKQNNDVEVVHNGEDANANTSSSESEDDLPASSEDDDDSDDGASEDGFFLLEKNETDHKKSKSVSDNEGHQSQLSAKKSTLPGGYDPRLREPSYCNADRVSWWELMVLASHAHPSVATMARTLLSGANIVYNGNPLNDLSLTAFLDKFMEKKPKQSTWHGGSQIEPAKQMDVNNQLIGAEILSLAEADVPPEDLVFHKFYTNKMSSTSKPKKKKKKSADEEAAEELFDIDDDGEVDGGDESDNEEIENLLDSADPSLGADSDYDYDDLDKVADEEDEDLIGDDYDAEIDIPSDMEEDEADVPIDDDVVGSDDDDIEVGDFDDASDGDVEEVVKRKRKHKSGGKSGVSPFASYEEFEHLMEDDDHTDKKPTKKNKSDNEPTKKNKSKKRKK 1032
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00452 1032 MobiDBLite consensus disorder prediction 442 458 - -
Cca11g00452 1032 MobiDBLite consensus disorder prediction 847 1032 - -
Cca11g00452 1032 SUPERFAMILY ARM repeat 293 685 IPR016024 -
Cca11g00452 1032 MobiDBLite consensus disorder prediction 670 687 - -
Cca11g00452 1032 Pfam CBF/Mak21 family 511 762 IPR005612 -
Cca11g00452 1032 PANTHER CCAAT-BINDING FACTOR-RELATED 17 1013 IPR040155 -
Cca11g00452 1032 MobiDBLite consensus disorder prediction 688 708 - -
Cca11g00452 1032 MobiDBLite consensus disorder prediction 64 81 - -
Cca11g00452 1032 MobiDBLite consensus disorder prediction 438 458 - -
Cca11g00452 1032 MobiDBLite consensus disorder prediction 996 1024 - -
Cca11g00452 1032 MobiDBLite consensus disorder prediction 865 891 - -
Cca11g00452 1032 MobiDBLite consensus disorder prediction 656 730 - -
Cca11g00452 1032 MobiDBLite consensus disorder prediction 902 968 - -
Cca11g00452 1032 MobiDBLite consensus disorder prediction 82 96 - -
Cca11g00452 1032 MobiDBLite consensus disorder prediction 35 116 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00452 K14832 - gmx:100802669 1533.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00452 11 6197993 6206377 Cca11g00452 11 6197993 6206377 ECH