Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00424 ATGTGTGGGGTCTCTCTTCTGGCCTTTCTGCTGCTGCTATCCCTCTGCGCCGAAGCTTCGGTTCACGATTACAGAGGGGAGAAATTCTCCGCCAAAGGCAACGCCTTCGTCGTTCATGGAGGCAGCGAAGGAATTTACGCTTCTGCCCCCAATCTCACCGATACCTCCTCCCCACCTTCAAATCCAGGCTCTTACATACGGTTTGAAAGAATTACATTTCGGAGAAACAAGGAGTTTTCGAACTTTAGTTCATGGCCAATTCAAGCTGTTGTTTTTGAAGTTGAAGATAGAGAAAGAATTGGTGGTTCGGCCTATGGGGGTCAAAGGGCTGTCTGCTGCACGGGTGATCTAGCTAAACTCGGTGTATGTACCGAAGGGCAGGTCATTTACCGCCCTACGGTGGAGAATCCTGACTGGCCTCAAGTTTTTGGTGCCTCTTTTGAAATGGATGATGAAGAGGCAGTGCTGCCATTGAACACTATACAAATCACGAAAACTGGGATGTATAACTTGTATTTCATCCATTGTGACACAAGGCTTAAAGAATTGGTTGTGGAAGGGAAAACTGTGTGGAAAAATCCCTCTGGTTATTTGCCTGGTAGAATGGCACCTATGAAAGTTTTCTACCAATTCATGTCTTTTGCATATGTATTGCTTGGGATCTTTTGGTTCTCTCAATATGCTAGATTTTGGAAGGAAATATTTCCCCTGCAGAACTGCATCACCCTAGTGATAACCCTAGGCATGTTTGAGATGGCACTGTGGTACTTTGACTATGCTGAATTCAGTGAGACTGGAATCAGGCCAACTGGGACAACCATATGGGCAGTCACCTTTGGGACTGTTAAGCGGACAGTGGCACGTTTGGTCATCTTAATGGTTTCAATGGGCTATGGTGTTGTGAGACCTACCCTTGGTGGGTTAACATCAAAGGTAGTTATGCTTGGTGGAACCTTCTTTCTTGCATCTGAAGTTCTTGAATTGGTAGAAAATGTTGGTGCCGTAAGTGATCTTTCTGGAAAGGCAAAACTGTTCTTGGTTCTTCCTTCTGCAGTATTGGATGTGTTCTTCATTCTTTGGATTTTCACTTCACTCTCTGCAACTTTAACTAAGCTTCAGACCAGAAGGATGATGATAAAATTGGATATTTACCGGAAGTTTACTAATGCTTTGGCAGCAGCTGTCATCGTATCTGTAGGCTGGATATGTTATGAGCTTTATTTCAAATCAAATGATGTATACAATGAACAGTGGCAGAATGCATGGATCATCCCTGCCTTCTGGCAAGTTCTGTCTTACTCTCTCCTGTGTGTTATCTGCATTCTTTGGGCACCATCTCAAAGTGCAACACGATATGCTTACCGTGATGATGGGAGCGATGAGTTTGATAGGGATGAAACTACTTTAACGCTCATAAAACCATCACCTATTTCTTCAAAAGATTTTCCAAGTGTGCCAGATGCTAGACCAGTGCAAAGCAGTAACGGGGATTCAAATGATGATTTAGAAGAAGACAAGAGAGAATAA 1527 0.4361 MCGVSLLAFLLLLSLCAEASVHDYRGEKFSAKGNAFVVHGGSEGIYASAPNLTDTSSPPSNPGSYIRFERITFRRNKEFSNFSSWPIQAVVFEVEDRERIGGSAYGGQRAVCCTGDLAKLGVCTEGQVIYRPTVENPDWPQVFGASFEMDDEEAVLPLNTIQITKTGMYNLYFIHCDTRLKELVVEGKTVWKNPSGYLPGRMAPMKVFYQFMSFAYVLLGIFWFSQYARFWKEIFPLQNCITLVITLGMFEMALWYFDYAEFSETGIRPTGTTIWAVTFGTVKRTVARLVILMVSMGYGVVRPTLGGLTSKVVMLGGTFFLASEVLELVENVGAVSDLSGKAKLFLVLPSAVLDVFFILWIFTSLSATLTKLQTRRMMIKLDIYRKFTNALAAAVIVSVGWICYELYFKSNDVYNEQWQNAWIIPAFWQVLSYSLLCVICILWAPSQSATRYAYRDDGSDEFDRDETTLTLIKPSPISSKDFPSVPDARPVQSSNGDSNDDLEEDKRE 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00424 508 PANTHER LUNG SEVEN TRANSMEMBRANE RECEPTOR 8 508 IPR009637 GO:0016021
Cca11g00424 508 PANTHER LUNG SEVEN TRANSMEMBRANE RECEPTOR FAMILY PROTEIN 8 508 - -
Cca11g00424 508 MobiDBLite consensus disorder prediction 458 508 - -
Cca11g00424 508 Pfam Lung seven transmembrane receptor 163 448 IPR009637 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00424 Cca-Chr11 5820369 5823922 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00424 - - gmx:100806912 969.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00424 11 5820369 5823922 Cca11g00424 11 5820369 5823922 ECH