Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00421 ATGGCCGACTGTTTTTCCAGCTCCGTCGAATTCGGACTGAACCTCTCCAAGCGAGTCTACTACGGGAAAGGAATGGCTCCGTCGCCGGCGACGGCGATGGAAAGGTCAGCGGAGGGATTCCTTCCGACGGCGCCGATGTGCTACGCGGTGATATCGGATCCGGAGAAAGTGGAGAACCCGGACATTCGAAGCTACCAGCCGTACGTGCTGGGCGAGTGCGATCCTCCGGCGCTGATTCCGCTTCAGGTTCTCGGAGTTGGCATGGAAGTGGAGTGCTCCTTGGACACGGCGTTCGTAACGGTCACCGGAAAGTGGCGCGTGCATTGCGTCACGGCAAGAAGTACGTGTGACTGCCAGGTTGCCATACCTATGGGTGAACAGGGTTCACTTCTAGGTCTAGAGGTTGATGGTTCCGGAAGATCTTACCACACTGAATTGATCTCTCTGAAAGATGAGAAGGATAAGGATAAAGTGGCCAAAGCTAAAGACGGATACTTTTTGAACAGTCGAATATACACCATTAAGATTCCACAGTTTAGGGGAGGCTCCGTCTTCTCAATTAAAATCAAATGGTCCCAGAAAATTTTATTTCATGATGGTCAGTTATCAGTCTGTGTCCCTTTCAGCTTTCCCTCTTACGTCAACCCTGTTGGGAGAAGAATTTCTAAGAAAGAGAAGATATTTTTGAAAGTCAATTCTGGTGGTGCAACGGAAATGTTATGCAAAACCGCCAGTCATCCTTTTAAGGAACTATTGCGCCAAGCCGGCAAATTAAATTTATTATATGAAGCAGAAGTGCTAGAATGGTCAAGTACAGACTTCAATTTCTCGTACACTGTTACTTCAAATGACATTTTTGGAGGTCTTCTCTTGCAATCTCCATTCCTGCGTGATTTTGATGAGAGAGAGATATTTTGCTTGTATCTTTACCCGGGAAACAGCCAGGATGGAAAGGTTTTTAAGAAGGATGTGGTGTTTATAGTAGATATAAGCGTAAGCATGAAGGGAAGTCCGCTTGAAAACACAAAGAATGCACTTCTGACATCACTCTCTCAACTACATGCACAAGATACATTTAACATTATAGCTTTCAATGGGGCGGTATCCTTATTTTCGTCATCAATGGAAACGGCTACACAGGAAGCAATTTTGAATGCTACCAAGTGGGTTGATACTAATTTTATTGCTAATGGTGACACTAATATCATGCTTCCCTTAACTCAGGCAATGAAGCTACTTGAGAAATCAACTGATTCAGTCCCTCTTATTTTTCTCGTTACTGATGGGGCTGTTGACGATGAGAGAGAAATATGCAATTTTGTGACAAGCTATGTATCAAGGGGGCAATTGGTTCGAACACCACGCATATGTACATTTGGCATAGGTTTATATTGCAACCACTACTTCCTGGAAATGCTAGCGCAAATTGGGAGGGGCCACTATGATTTTGCTCATGATTTAGATGCAATCGACTTTAGAATGCAAAGGCTGTTCAGTACAGCTTCATCGGTTACGGTTGCTGATATAACAATCGAAGGTTTAGAAGGTCTTGATTCATATGAGTTATTCCCAACTCATATACAAGATCTATCATTTGGAAGTCCGTTGATTCTATCAGGCAGATACAGTGGAACTTTTCCCCAATCAGTTAAAGTCACCGGTACTTTGGCAGATATGACTAACTTCGTAGTAGACCTTAAAATGAAAAGAGAAAAGGATATTCAGCTCAGTAATGTTCTTTCAAAGAGACATATAGACTTGGTCACTGCTCAAGCCTGGTTATTAAAAAGTGAAGAGCTGGAGGAGAAGGTTTCTAAAATGAGCATTCAAAATAAAGTCCCGTCAGAGTATACCTGCATGAGCATGGTTCTTGTACAGAGTGATGAAGGGAAGAAGGCACCTGAACAATTTCTGTTACAAAAGGCATACAAGAAGCTTAGCTTCCAGAGTTTGGAAATGAACAACATCCAGAAGTTATTCCTTGGAGGGTGGAGTCTTGGATTTGGAGACGTGAAAGCAACTGCTGAGAACTTGGCACCAGCTATAAAAGAAGCAAAACCACCTGAAGGACTACTGGGGAAGGCTGCTTCCACTTGTTGCAGTCGATTGGCTGATAACTGTTGTGGCATGTGTCTGCTGCAGACTTGCAATTTTATGAATGACAAGTGCACCATCGTTTGCACTCAACTTTGTGCAGCCCTCGCATGTTTTGAGTTAATCAAATGCTGTATTGAGCTCTGCGACTGTGATTGTTTGTAG 2259 0.4356 MADCFSSSVEFGLNLSKRVYYGKGMAPSPATAMERSAEGFLPTAPMCYAVISDPEKVENPDIRSYQPYVLGECDPPALIPLQVLGVGMEVECSLDTAFVTVTGKWRVHCVTARSTCDCQVAIPMGEQGSLLGLEVDGSGRSYHTELISLKDEKDKDKVAKAKDGYFLNSRIYTIKIPQFRGGSVFSIKIKWSQKILFHDGQLSVCVPFSFPSYVNPVGRRISKKEKIFLKVNSGGATEMLCKTASHPFKELLRQAGKLNLLYEAEVLEWSSTDFNFSYTVTSNDIFGGLLLQSPFLRDFDEREIFCLYLYPGNSQDGKVFKKDVVFIVDISVSMKGSPLENTKNALLTSLSQLHAQDTFNIIAFNGAVSLFSSSMETATQEAILNATKWVDTNFIANGDTNIMLPLTQAMKLLEKSTDSVPLIFLVTDGAVDDEREICNFVTSYVSRGQLVRTPRICTFGIGLYCNHYFLEMLAQIGRGHYDFAHDLDAIDFRMQRLFSTASSVTVADITIEGLEGLDSYELFPTHIQDLSFGSPLILSGRYSGTFPQSVKVTGTLADMTNFVVDLKMKREKDIQLSNVLSKRHIDLVTAQAWLLKSEELEEKVSKMSIQNKVPSEYTCMSMVLVQSDEGKKAPEQFLLQKAYKKLSFQSLEMNNIQKLFLGGWSLGFGDVKATAENLAPAIKEAKPPEGLLGKAASTCCSRLADNCCGMCLLQTCNFMNDKCTIVCTQLCAALACFELIKCCIELCDCDCL 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00421 752 Pfam von Willebrand factor type A domain 322 483 IPR002035 -
Cca11g00421 752 PANTHER INTER ALPHA-TRYPSIN INHIBITOR, HEAVY CHAIN-LIKE PROTEIN 1 749 - -
Cca11g00421 752 ProSiteProfiles VWFA domain profile. 323 497 IPR002035 -
Cca11g00421 752 PANTHER INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN-LIKE PROTEIN 1 749 - -
Cca11g00421 752 SUPERFAMILY vWA-like 322 492 IPR036465 -
Cca11g00421 752 SMART VWA_4 321 502 IPR002035 -
Cca11g00421 752 Gene3D von Willebrand factor, type A domain 321 501 IPR036465 -
Cca11g00421 752 CDD vWA_interalpha_trypsin_inhibitor 320 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00421 Cca-Chr11 5766996 5777583 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00421 - - gmx:100807956 1314.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00421 11 5766996 5777583 Cca11g00421 11 5766996 5777583 ECH