Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00391 ATGTCTGCTGAATCGCCCACTTCTGTTCGTAAAGTGGTTGTTCATCTTAGAGCCACCGGTGATGCCCCTATTCTCAAGCAATCCAAGTTCAAGATAGCAGGAACTGATAAGTTTGCTAAAGTGATAGACTTTCTTCGCCGGCAGCTTCATAGGGAGACATTGTTTGTATATGTCAATAGTGCCTTTTCACCAAACCCTGATGAATTGGTCATTGATTTATTTAATAATTTTGGTTTTGATGGCAAACTGGTGGTCAACTACGCTTGCTCTATGGCATGGGGCTAA 285 0.4211 MSAESPTSVRKVVVHLRATGDAPILKQSKFKIAGTDKFAKVIDFLRRQLHRETLFVYVNSAFSPNPDELVIDLFNNFGFDGKLVVNYACSMAWG 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00391 94 Gene3D - 5 94 - -
Cca11g00391 94 SUPERFAMILY Ubiquitin-like 10 93 IPR029071 -
Cca11g00391 94 PANTHER AUTOPHAGY PROTEIN 12 1 94 IPR007242 GO:0000045|GO:0005737
Cca11g00391 94 PANTHER UBIQUITIN-LIKE PROTEIN ATG12B 1 94 - -
Cca11g00391 94 Pfam Ubiquitin-like autophagy protein Apg12 11 94 IPR007242 GO:0000045|GO:0005737
Cca11g00391 94 CDD Ubl_ATG12 11 93 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00391 K08336 - gmx:100527905 186.422
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00391 11 5277488 5283248 Cca11g00391 11 5277488 5283248 ECH