Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00381 ATGGTCCCTGTTTCCAGAACGGAGGGTGCCACTGGTACTCACTTGCTCTCCGCAAGAGTGCGCAAAACCATTCAATCTATCAAGGAAATCGTGGGAAATCATTCTGATGCTGATATCTATGTCGCCCTCAAGGAAACCAACATGGATCCTAACGAAACCACTCAGAAATTGCTCAACCAAGATCCATTTCATGAGGTGAAAAGAAGGAGGGACCGAAAGAAGGAGACCCAGAATGTTGTGAACAAGGGTCCATCTGACTCGCGAAGGCAGTCTGAGAATGGCGGCCAAGGAATGAAATTTCACACCCCTTCTGAACGTAACGAGAATGGTAGTCAAGGAATGAAATTTCACTCCTCTTCTGAGCGCAATGTTCGAAGAGCAAACTATTCTCGGAGTACTTTACCTGGCATCAGCAGAGAGTTCCGTGTTGTTAGAGACAACAGAGTAAATCATATATATAAAGAAGTAAAGCCTCATCCGCAGCAGCACTCCACATCCACCACTGAGCAGTTAATTGTAAACACTTCTGAAAAGGGCTCATCCACTTCCTCAAATCATAGGTCATCTGGTGCTAGGAATTCTTATCAGGCACTAAATGGTCCTTCTGATTCACATGCTAAATCCCCAAAAGATGCTGTTGCAAATATCATTGACAGAAAAATGGCATCTGAGGATAAGGATAAGCAAGGCATGGTTTCGAATGCAGCAGGACGGGTGCAACCAATGAAGCCAAACAACATCCATCAACAAAATTCTGCATCAGTGGCATCAACCAGTTCTGCTGTTGGGGTGTATTCCTCTTCAACAGATCCAGTTCATGTGCCCTCTCCTGATTCTAGATCATCAGGTGTTGTTGGAGCAATTAGGCGTGAAGTTGGGGTTGTTGGTGTTCGGTGGCAGTCTTCAGACAACAAAGTAAAACAATCATTTGTTCCTAGTAGCTCTTATGCTAATTCCCTTGTGGGAAAAGATGGTACATCCGCAGATTCTTTTCAATCAGTTGGTGCTGTCTCAAAGACTGAACAATTTAGTCAAACTAATGTAACTGAACCCTCATTATCTGGTATGCCAGCTAGCAGACCGTCTCTGAACAACCAGTATAATAATAGGCCACATCAACAACTTGTGGGACACCAAAGAGTTTCCCAGCAAAATAAAGAGTGGAAACCTAAATCAAGCCAGAAGTCAAACAGTAATAATCCTGGAGTAATTGGAACCCCAAAAAAGGCTGCTGCTTCTACTTCACCTCCAGCAGAAAGTTCTGGAGATATTGAATCAGATACAGCAGAGCTTCAAGATAAATTCTCCCAAGCAAATCTATATGAGAACCAAAATGTTATTATAGCACAGCATATTCGAGTTCCAGAGACTGATCGCTGTCGGCTGACCTTTGGTACCATTGGGACTGAGCTTGATTCTTCAAGGCTTCAATCTAAGTATAACTTAATAGGAGCTTCCGAAAAATCAAATGAGGAATTGACTGCAAGTTTGACAGTACCTGCTCCGGAGTTGTCCTCTGCTGATATTTCTGGGAGCAAACAGGTGGACTTGCGGGATGACCACATTAGAAGTTCTGGGTCAGACTCTCCAGCATCCGGTGCTGCTTCTGAGCAACAATTGCCTGATAACAAAGACTCTTCAAACACTCAGAATCTGGACAACTATGCCAATATTGGATTGGTACGTGATAGCAGTCCATCCTATGCACCTTCAGAACCACAGCAACAAGATTCTCATGATATGCCAGGCTTTGCAGCATACGATCCTCCAACTGGTTATGACATTCCTTATTTCAGACCCACAATTGATGAAACTGTACGAGGGCAGGGTTTGTCATCTCAGGAGGCTTTGATCTCCCATGCAACCAATAATACTCCAGCTTCCACAATCGCCATGGTACAACAACAGCAACCTCCTGTGCCGCAGATGTATCCGCAAGTTCATGTTTCACACTTTGCTAATCTTATGCCATATCGTCAGTTTCTGTCACCGGTCTATGTTCCACCAATGGCCATGCCTGGATATTCGAGTAATCCCCCCTATCCTCACCCAACAAATGGCAGCAGTTACTTGTTAATGCCTGGAGGTGGTTCCCATCTCAATGCCAATAACCTCAAATATGGAGTTCAACAGTTCAAGCCTGTTCCTGCTGGTAGTCCTACAGGGTTTGGAAATTTTGCTAATCCCACTGGATATGCCATGATAACTCCTGGTGTGGTTGGCGGTGCAACAGCTTTAGAAGATTCATCTCGAGTCAAGTACAAAGATAATCTTTATGTCCCAAATCCTCAGGCTGAGACATCAGAAATCTGGTTACAGAATCCAAGGGATCTTCCAGGCATGCAATCGACTCCTTACTATAACATGCCAGGGCAAACACCTCATGCAGCTTACATGCCTTCACACACTGGTCATGCTTCTTTCAATGCAGCTGCAGCTCAGTCTTCTCACATGCAGTTTCCTGGCATGTACCATACTCCTCCACAGCCTGCTGCCATGGCTAATCCTCACCACTTAGGGCCACCAACTATTGGCAACAATGTTGGTGTTGGGGTGGCTGCAGCTGCTCCTGGAGCACAGGTTGGTGCATATCAGCAGCCCCAATTGGGCCACATCAACTGGACAACAAATTTCTGA 2637 0.4501 MVPVSRTEGATGTHLLSARVRKTIQSIKEIVGNHSDADIYVALKETNMDPNETTQKLLNQDPFHEVKRRRDRKKETQNVVNKGPSDSRRQSENGGQGMKFHTPSERNENGSQGMKFHSSSERNVRRANYSRSTLPGISREFRVVRDNRVNHIYKEVKPHPQQHSTSTTEQLIVNTSEKGSSTSSNHRSSGARNSYQALNGPSDSHAKSPKDAVANIIDRKMASEDKDKQGMVSNAAGRVQPMKPNNIHQQNSASVASTSSAVGVYSSSTDPVHVPSPDSRSSGVVGAIRREVGVVGVRWQSSDNKVKQSFVPSSSYANSLVGKDGTSADSFQSVGAVSKTEQFSQTNVTEPSLSGMPASRPSLNNQYNNRPHQQLVGHQRVSQQNKEWKPKSSQKSNSNNPGVIGTPKKAAASTSPPAESSGDIESDTAELQDKFSQANLYENQNVIIAQHIRVPETDRCRLTFGTIGTELDSSRLQSKYNLIGASEKSNEELTASLTVPAPELSSADISGSKQVDLRDDHIRSSGSDSPASGAASEQQLPDNKDSSNTQNLDNYANIGLVRDSSPSYAPSEPQQQDSHDMPGFAAYDPPTGYDIPYFRPTIDETVRGQGLSSQEALISHATNNTPASTIAMVQQQQPPVPQMYPQVHVSHFANLMPYRQFLSPVYVPPMAMPGYSSNPPYPHPTNGSSYLLMPGGGSHLNANNLKYGVQQFKPVPAGSPTGFGNFANPTGYAMITPGVVGGATALEDSSRVKYKDNLYVPNPQAETSEIWLQNPRDLPGMQSTPYYNMPGQTPHAAYMPSHTGHASFNAAAAQSSHMQFPGMYHTPPQPAAMANPHHLGPPTIGNNVGVGVAAAAPGAQVGAYQQPQLGHINWTTNF 878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00381 878 MobiDBLite consensus disorder prediction 338 426 - -
Cca11g00381 878 MobiDBLite consensus disorder prediction 80 118 - -
Cca11g00381 878 MobiDBLite consensus disorder prediction 338 404 - -
Cca11g00381 878 MobiDBLite consensus disorder prediction 175 203 - -
Cca11g00381 878 MobiDBLite consensus disorder prediction 51 131 - -
Cca11g00381 878 SUPERFAMILY UBA-like 19 77 IPR009060 GO:0005515
Cca11g00381 878 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 1 878 - -
Cca11g00381 878 MobiDBLite consensus disorder prediction 61 79 - -
Cca11g00381 878 MobiDBLite consensus disorder prediction 504 589 - -
Cca11g00381 878 MobiDBLite consensus disorder prediction 175 209 - -
Cca11g00381 878 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 1 878 - -
Cca11g00381 878 MobiDBLite consensus disorder prediction 264 283 - -
Cca11g00381 878 MobiDBLite consensus disorder prediction 526 561 - -
Cca11g00381 878 Pfam GBF-interacting protein 1 N-terminal 18 75 IPR009719 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00381 Cca-Chr11 5026628 5034967 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00381 - - gmx:100807606 1511.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00381 11 5026628 5034967 Cca11g00381 11 5026628 5034967 ECH