Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00373 ATGAACGTTGAAAGTGAGTCTAGAGAAGAGATGAAAGGGTGCAGAAGAGTTTTAAGAAAAGTAGGGAATTGGTTGGAACACAAGAATAATGGTGAATGGTTGAAGGACATGAGGGGGATGCTAAGCTTGGTGGCTACAGTAATCGCAACTATGACCTTTCAAAGTGCTCTTAATCCACCAGGTGGTGTTTGGCCAACAAAGGAGGGTTTAGTTGAGACATGTTCATCATACAAGCAAGTATTTCCGAATCCATGTCCTGGAGAAGCTGTCTTAGCTTTTATCAAACCAGACAATTATGCTGTCTTCCTATTTTTCAACACGTTATGTTTGGTTTCATCTTTGGCTCTTTGTCTCTTGCTGGACTCCTCACACTTTTCCTTTGCCTGCGCCTATTTGTTTGGATTGTCACTAAATGCATTAACAGATGCAAACCATGACATCCAATCTTATTCAGGCAATCGCATGTCCAACTTCCTTGTTTTTGGACTATACTATCATACAGAAGCAACCGCAGGTAGGAGATATATATCAATTACGATGAACGAAGAAAGTGAGTCAAAATTAGAATGGTGGACAAGAGTTATTAAAAATGTTGGAAATTGGCTGGCACACAAGGATAAGGTTAAATGGTTGAAGGACATGAGAGGATTGCTATGTGTGGTGGCTACTGTAATCGCAACAATGACCTTTCAAAGTGCAATGAATCCACCAGGTGGCGTTTGGCCACCAGGTGGCGTTAGGCCACCAATGCCAATAGCTCGTGAAAAAATTAAACAAAGCCAATGTGGACAAGTTGTGTGTCCTGGACAGTCTGTCCTAGCTGTTGTTTTAGAAGATGAATACGAGCTATTCCTTATTTGGAACACAACATGTTTCGTTTCATCTCTAGCAGTTTGTCTCTTGCTTGTAAGTGGCTTTCCTCTGAATCACCGATTTTTCACCTGGCTTTTGTCAATAGGCATGTGCATCACCATCTCTAGCCTCACACTTACTTACCTCTCTGTTGTGGATATGACCAGCCCAGGTGACCTTTGGGTTGAAAACTTTTTCATCTTTCGAATAGTTCTTTATATTTGGATTTCACTGTTAGGACTTGTCGCTTTTGTGCATTCCCTTCGCATATTTATTTGGATTGTCACTTTGTGGATTGACAGACGTAATAAAAAACCCTAA 1173 0.4092 MNVESESREEMKGCRRVLRKVGNWLEHKNNGEWLKDMRGMLSLVATVIATMTFQSALNPPGGVWPTKEGLVETCSSYKQVFPNPCPGEAVLAFIKPDNYAVFLFFNTLCLVSSLALCLLLDSSHFSFACAYLFGLSLNALTDANHDIQSYSGNRMSNFLVFGLYYHTEATAGRRYISITMNEESESKLEWWTRVIKNVGNWLAHKDKVKWLKDMRGLLCVVATVIATMTFQSAMNPPGGVWPPGGVRPPMPIAREKIKQSQCGQVVCPGQSVLAVVLEDEYELFLIWNTTCFVSSLAVCLLLVSGFPLNHRFFTWLLSIGMCITISSLTLTYLSVVDMTSPGDLWVENFFIFRIVLYIWISLLGLVAFVHSLRIFIWIVTLWIDRRNKKP 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00373 390 PANTHER - 183 347 - -
Cca11g00373 390 PANTHER - 30 120 - -
Cca11g00373 390 Pfam Domain of unknown function 32 121 IPR026961 -
Cca11g00373 390 Pfam Domain of unknown function 209 332 IPR026961 -
Cca11g00373 390 PANTHER CASKIN 183 347 - -
Cca11g00373 390 PANTHER CASKIN 30 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00373 Cca-Chr11 4888173 4894718 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00373 133 317 Miscellaneous Gene Families AT1G10340 22.703 1.74e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00373 - - gmx:100815832 246.128