Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00370 ATGAATGAAATTAAGCAGCCGAGAGAAGAGAAGAAAGGATGGAGAAAAGTTTTAAAAGTTATAAGGAATTGGATGGCACACAAGAATAAAAATGAATGGTTGAAGGACATGAGAGGGATGCTAAGTTTGGTGGCTACAGTAATAGCCACAATAACATTTCAAAGTGCTCTTAATCCACCAGGTGGTGTTAGACCAGCATCAGATGACAGTGATGATGTTCTATGTCATAACAGTTCAGACACGAATCCATGTCCCGGAGAATCTGTCCTAGCTGTTATATACCCAGACACATATGAGAGATACCTTTTTTGCAACACTTTATGTTTCGCTTCATCTCAAGCTGTTTGTCTTTTGCTTGTGAGTGGGTTTCCTATGAATCACCGATTCTTCACCTGGCTGTTGTTAATAGGCATGTGCATCACTCTCTCCAGCCTCACTTTAGCCTACTTGTATGGTGCGTTTATGATTACTCCAAATCCCGTTTGGGCTGAAACTGCTTTAGGCATGTTTGCTGCAATTATTTTGATTTGGCTTGGGCTGCTTGGACTCATCGCACTTTTCCTTTCCTTCCGCCTAATTGTTTAG 585 0.412 MNEIKQPREEKKGWRKVLKVIRNWMAHKNKNEWLKDMRGMLSLVATVIATITFQSALNPPGGVRPASDDSDDVLCHNSSDTNPCPGESVLAVIYPDTYERYLFCNTLCFASSQAVCLLLVSGFPMNHRFFTWLLLIGMCITLSSLTLAYLYGAFMITPNPVWAETALGMFAAIILIWLGLLGLIALFLSFRLIV 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00370 194 Pfam Domain of unknown function 32 155 IPR026961 -
Cca11g00370 194 PANTHER CASKIN 25 164 - -
Cca11g00370 194 PANTHER - 25 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00370 Cca-Chr11 4862510 4863094 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00370 9 193 Miscellaneous Gene Families AT1G10340 21.466 5.91e-08 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00370 - - gmx:100806562 249.98