Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00356 ATGGTTGATAGCAATCCTTCCTCTGGTTCACCTGAAGAAACACAAAATCCCAACCCAGATGGGAATGCACCTGCTGAAAGTGATCTTGCGTTAGATAATTTAGCACAAAAAGTTCAAGAATCTCTCTCTTTGGAAAAAAGACATAAATTTTGGGAAACCCAACCTGTTGGGCAATTCAAGGATATAGGGGACTCGAGTTTGCCAGAAGGCCCTATTGAACTTCCAACTCCTTTATCTGAGGTCAAACAAGAACCATACAACCTTCCTGACCCCTATGAATGGATTACTTGTGACATCAACTCTGAGGTGATGTGTGATGAGctaattgatgttggTTTCTCTCGGCTTGGTGCACGAATGACAATGAGTCGAACCATCAAGCTTTACAAGCTACCAGAATCAACAGTCACCCCAGGGTTTAGAAAGATGGAAATTCATGATGTTCCTGCAGTTACAAGGCTAATTAGGAATTATTTGAGCCATTTTGTTGTTGCACCTGATTTTGATGAAAATGATGTGGAGCATTGGCTTCTGCCAAGGGAGAACGTTATTGATAGTTATCTGGTTGAAAGTCCTGAAACTCACGTGGTCACCGACTTTTGTAGTTTTTACACACTTCCTTCTAGTATCCTTGGCCACCAAAATTATTCAACTTTGAAAGCAGCCTATTCATTTTATAACGTGTCCACAGTCACTCCTTTGCTTCAGCTGATGAATGATGCTCTCATTGTCGCAAAACAGAAGGATTATGATGTTTTCAATGCATTGGATGTCATGCAGAATGAAACCTTCTTGAGGGAACTCAAGTTTGGACCGGGTGATGGGAAACTTCATTATTATCTTTACAACTACCGAATAAGGCATGCATTGAAGCCGTCAGAGCTGGGGCTTGTGCTTCTGTAA 903 0.4086 MVDSNPSSGSPEETQNPNPDGNAPAESDLALDNLAQKVQESLSLEKRHKFWETQPVGQFKDIGDSSLPEGPIELPTPLSEVKQEPYNLPDPYEWITCDINSEVMCDELIDVGFSRLGARMTMSRTIKLYKLPESTVTPGFRKMEIHDVPAVTRLIRNYLSHFVVAPDFDENDVEHWLLPRENVIDSYLVESPETHVVTDFCSFYTLPSSILGHQNYSTLKAAYSFYNVSTVTPLLQLMNDALIVAKQKDYDVFNALDVMQNETFLRELKFGPGDGKLHYYLYNYRIRHALKPSELGLVLL 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00356 300 Gene3D - 47 107 - -
Cca11g00356 300 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 46 109 IPR016181 -
Cca11g00356 300 MobiDBLite consensus disorder prediction 1 30 - -
Cca11g00356 300 PANTHER N-MYRISTOYL TRANSFERASE 26 107 IPR000903 GO:0004379|GO:0006499
Cca11g00356 300 PANTHER N-MYRISTOYL TRANSFERASE 107 300 IPR000903 GO:0004379|GO:0006499
Cca11g00356 300 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 105 300 IPR016181 -
Cca11g00356 300 ProSitePatterns Myristoyl-CoA:protein N-myristoyltransferase signature 2. 269 275 IPR022678 GO:0004379
Cca11g00356 300 MobiDBLite consensus disorder prediction 1 22 - -
Cca11g00356 300 Pfam Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain 110 288 IPR022677 GO:0004379
Cca11g00356 300 PIRSF N-myristl_transf 105 300 IPR000903 GO:0004379|GO:0006499
Cca11g00356 300 PIRSF N-myristl_transf 12 109 IPR000903 GO:0004379|GO:0006499
Cca11g00356 300 Gene3D - 108 300 - -
Cca11g00356 300 PANTHER GLYCYLPEPTIDE N-TETRADECANOYLTRANSFERASE 107 300 - -
Cca11g00356 300 PANTHER GLYCYLPEPTIDE N-TETRADECANOYLTRANSFERASE 26 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00356 Cca-Chr11 4618377 4619681 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00356 107 300 Acyl Lipid Metabolism Gene Families AT5G57020 82.474 1.47e-115 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00356 K00671 - gmx:100776780 378.252