Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00348 ATGATGGCAAGATTATTCTGTTTCCTGCTAGCTCTGCAAATTGTGAGTTTGGTTTCTGCAGTAAGGAAGCCGTTTCTTCCAGGTCAAGAAGAGGCTCTACAGTCTCCAAAGGGTTTAACGGGCACATCAAAGACAATGAAGGATGCATATGATCGAGGAGTGAGCAAAGTAGGGTCAAGTCCACCAAGTTGTGAGAACAAGTGCTATGGTTGTGTTCCATGTGAAGCCATCCAAGTTCCCAGCACAAGCATCAGGCACAACCATTTGGGCATACAGTACGCAAATTATGAGCCTGAGAGCTGGAAATGCAAGTGTGGTCCCTCCTTCTATAGCCCATGA 339 0.4631 MMARLFCFLLALQIVSLVSAVRKPFLPGQEEALQSPKGLTGTSKTMKDAYDRGVSKVGSSPPSCENKCYGCVPCEAIQVPSTSIRHNHLGIQYANYEPESWKCKCGPSFYSP 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00348 112 PANTHER EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 3 2 112 - -
Cca11g00348 112 Pfam Epidermal patterning factor proteins 57 112 - -
Cca11g00348 112 PANTHER EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 4 2 112 IPR039455 GO:0010374
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00348 Cca-Chr11 4504064 4505037 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00348 - - ccaj:109806846 238.424