Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00343 ATGGCGTCTCTGAGAAGTGGAGCTTCGTTGCTGAATCGCCTTTCGAAATCGCTTCTTCATTCCAACAACCCTAAACCTCTATTATTCCCTTCTCTCTCTAAGCTTCCCGCTGCAATTTCTCCCCAAAACGACGCCGAATTTCCCCACCACCAACCCTTTCTCTACCCATGCGGCCTCCCCTCTCTCCGCTTCTTCTTGCCTCAGGGGGATGCTCCTTCGGCTGATGAACCGATGCTTTTATTCCCCAAAAGGACATTTCAACCTAGCCTTATTAAACGAAAGAGGAACCATGGGTTTTTTGCCCGGAAAGCAACCAAGGGTGGCAGAAAAGTAATTGCTCGAAGAATAGCCAAGGGCCGGTTTAGGATTACAGCTTAG 378 0.4921 MASLRSGASLLNRLSKSLLHSNNPKPLLFPSLSKLPAAISPQNDAEFPHHQPFLYPCGLPSLRFFLPQGDAPSADEPMLLFPKRTFQPSLIKRKRNHGFFARKATKGGRKVIARRIAKGRFRITA 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00343 125 Hamap 50S ribosomal protein L34 [rpmH]. 82 125 IPR000271 GO:0003735|GO:0005840|GO:0006412
Cca11g00343 125 ProSitePatterns Ribosomal protein L34 signature. 83 102 IPR020939 GO:0003735|GO:0005840|GO:0006412
Cca11g00343 125 Gene3D - 81 125 - -
Cca11g00343 125 PANTHER RIBOSOMAL PROTEIN L34 11 125 - -
Cca11g00343 125 TIGRFAM rpmH_bact: ribosomal protein bL34 83 125 IPR000271 GO:0003735|GO:0005840|GO:0006412
Cca11g00343 125 Pfam Ribosomal protein L34 83 125 IPR000271 GO:0003735|GO:0005840|GO:0006412
Cca11g00343 125 PANTHER MITOCHONDRIAL RIBOSOMAL PROTEIN 34 FAMILY MEMBER 11 125 IPR000271 GO:0003735|GO:0005840|GO:0006412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00343 K02914 - gmx:100305667 204.527