Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00321 ATGAAGAAGAAGATGATGGCAACCACCGCCATCTCcctcctcttctccgctctcttcctcatctcctccgtccacgccttctacctccccggcgtcgctcctcGCGATTTCCAAATTGGTGACCCCCTCTATGTCAAAGTGAACAAATTGTCGTCTACGAAGACTCAGCTTCCATATGACTACTACTACTTGAACTATTGCAAGCCCAAGAAGATATTGAACAGTGCGGAAAATTTGGGAGAGGTTCTTAGAGGTGATCGCATTGAGAATTCAGTATATACATTTCATATGAGGAAGGAACAGTCTTGTACTGTTGTTTGTCATATAACTTTGGATGCTGATTCTGCGAAGAATTTTAAAGAAAAAATTGATGATGAATATCGAGTGAACATGATTTTGGATAACCTTCCAGTTGCTGTTCTTAGACAAAGGAGGGATGGAAGTCAATCAACAACATATGAACATGGTTTTCGTGTTGGATTCAAAGGAAACTATCAAGGGAGTAAGGAGGAGAAATATTTTATCAATAACCACTTGAGCTTTAGAGTCATGTATCACAAGGATCCTGAAACTGGTGCTGCACGTATTGTTGGATTTGAGGTCACACCAAACAGTATAAATCATGAATTCAAGGAGTGGAATGACAAGAATCCACAGGTAACAACATGCAATAAAGATACCAAGAATTTGATGCAAGGTAGTACTGTCCCACAAGAAGTTGATACAAAAAAGGATATCGTGTTCACATATGATGTTTCCTTCAAGGAAAGTGAGATCAAATGGGCATCACGGTGGGACACATATCTTTTAATGAATGACGATCAGATCCACTGGTTCTCTATCATTAACTCTCTGATGATTGTTCTTTTCCTGTCTGGAATGGTGGCCATGATCATGATGAGAACTCTTTACAGAGACATTGCCAATTATAATCAACTAGAAACCCAAGATGAGGCCCAAGAAGAAACAGGGTGGAAGCTTGTTCACGGAGATGTTTTCAGGCCACCAGTCAATTCAAATTTGCTGTGTGTTTACGTCGGTACTGGTGTTCAGCTCTTTGCAATGACACTTGTGACAATGATATTTGCTTTGCTAGGGTTCTTGTCTCCATCTAATCGGGGAGGTCTCATGACTGCGATGGTTCTATTGTGGGTTTTTATGGGCTTATTTGCTGGGTACGCCTCAGCACGTTTGTACAAGATGTTCAAGGGCACAGAATGGAAAAGGAATACCTTGAAAACTGCATTTATGTTTCCAGGCATTCTTTTTGCTGTCTTCTTTGTGCTGAATGCCTTAATCTGGGGGGAGCAGTCCTCTGGGGCAGTCCCTTTTGGAACAATGTTTGCTCTGGTCTGCTTATGGTTTGGTATATCGGTACCCTTGGTTTTTGTGGGCAGTTACTTAGGTTTTAAAAAACCAGCAATTGAAGATCCAGTGAAGACTAATAAAATTCCTAGGCAGGTACCTGAGCAGGCATGGTATATGAAACCTGTCTTCTCGATTCTTATTGGAGGCATTCTTCCATTTGGTGCAGTGTTTATCGAGCTCTTCTTTATCCTGACATCAATATGGCTGAACCAGTTCTACTACATCTTTGGCTTCCTTTTCATAGTTTTTGTTATTCTGCTAATCACCTGCGCAGAGATTACTATTGTGCTTTGCTACTTCCAATTGTGCAGTGAGGATTACAATTGGTGGTGGAGATCTTACCTCACTGCTGGGTCCTCGGCTCTGTACCTTTTCCTCTACTCAATTTTCTACTTCTTTACCAAGTTGGAAATTTCAAAGCTGGTCTCAGGAATCCTTTACTTTGGATATATGATCATTGTTTCATATGCCTTCTTTGTGTTGACGGGAACTATTGGCTTCTATGCATGCTTCTGGTTTGTTCGCAAGATCTACTCTTCGGTGAAGATTGATTGA 1923 0.3916 MKKKMMATTAISLLFSALFLISSVHAFYLPGVAPRDFQIGDPLYVKVNKLSSTKTQLPYDYYYLNYCKPKKILNSAENLGEVLRGDRIENSVYTFHMRKEQSCTVVCHITLDADSAKNFKEKIDDEYRVNMILDNLPVAVLRQRRDGSQSTTYEHGFRVGFKGNYQGSKEEKYFINNHLSFRVMYHKDPETGAARIVGFEVTPNSINHEFKEWNDKNPQVTTCNKDTKNLMQGSTVPQEVDTKKDIVFTYDVSFKESEIKWASRWDTYLLMNDDQIHWFSIINSLMIVLFLSGMVAMIMMRTLYRDIANYNQLETQDEAQEETGWKLVHGDVFRPPVNSNLLCVYVGTGVQLFAMTLVTMIFALLGFLSPSNRGGLMTAMVLLWVFMGLFAGYASARLYKMFKGTEWKRNTLKTAFMFPGILFAVFFVLNALIWGEQSSGAVPFGTMFALVCLWFGISVPLVFVGSYLGFKKPAIEDPVKTNKIPRQVPEQAWYMKPVFSILIGGILPFGAVFIELFFILTSIWLNQFYYIFGFLFIVFVILLITCAEITIVLCYFQLCSEDYNWWWRSYLTAGSSALYLFLYSIFYFFTKLEISKLVSGILYFGYMIIVSYAFFVLTGTIGFYACFWFVRKIYSSVKID 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00321 640 SUPERFAMILY MFS general substrate transporter 281 461 IPR036259 -
Cca11g00321 640 Pfam Endomembrane protein 70 58 596 IPR004240 GO:0016021
Cca11g00321 640 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 8 640 IPR004240 GO:0016021
Cca11g00321 640 PANTHER TRANSMEMBRANE 9 SUPERFAMILY MEMBER 8 640 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00321 Cca-Chr11 4160010 4163845 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00321 25 640 Miscellaneous Gene Families AT3G13772 89.610 0.0 1172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00321 K17086 - gmx:100781403 1236.48