Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00301 ATGATGATGGAGCTTCATTCACATGGTAAAACAATTCAGGACGTTGAACGTGTTCTGCGTACGATCCCCTTGCACCCTAGAGTCATACCTGCTATTAAAGCAGCTCATGCTTTAGGGTGTGATTTGAGGATTGTGAGCGATGCCAACATGTTTTTCATTGAGACCATTTTGAACCACTTGGGGATAAGAGCATACTTTTCGGAGATCAATACTAATCCTGGTTATGTCAATGAAGAAGGAAGGTTAAGGATTTTACCTTACCATGACTTCAACAAAGCTTCACATGGCTGCACTTTGTGCCCTCCAAACATGTGCAAGGGTTTAATCATAGACAGAATCCAAGAATCAATTTCACAAGAGAACAAGAGGATCATATATCTTGGAGATGGTAGTGGGGACTATTGCCCAAGCTTGAGGCTGAAAGAGAATGATTTCATGATGCCAAGGAAAAACTTTCCTGTGTGGGATTTGATATGCAAAGACCCTTCAGTTATTAAGGCTGAAATCAATGGCTGGAGTGATGGAGAAGAATTGGAGCAAGTGTTGTTGCACTTGATCAACAAAATTTCCATTGAGGAAAAGGCTCACTTAATTTCATCTGATTGCAAACTACAAACTCTGTCTGTCTCTGCTTTGGAGTCTTTGCCCAAAGTCCTCCCAGTTCGGCCATAA 672 0.4152 MMMELHSHGKTIQDVERVLRTIPLHPRVIPAIKAAHALGCDLRIVSDANMFFIETILNHLGIRAYFSEINTNPGYVNEEGRLRILPYHDFNKASHGCTLCPPNMCKGLIIDRIQESISQENKRIIYLGDGSGDYCPSLRLKENDFMMPRKNFPVWDLICKDPSVIKAEINGWSDGEELEQVLLHLINKISIEEKAHLISSDCKLQTLSVSALESLPKVLPVRP 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00301 223 PIRSF PLP_phosphatas_PHOSPHO2 1 190 IPR016965 GO:0016791
Cca11g00301 223 PANTHER PHOSPHATASE, ORPHAN 1, 2 1 221 IPR016965 GO:0016791
Cca11g00301 223 SUPERFAMILY HAD-like 4 140 IPR036412 -
Cca11g00301 223 Pfam Putative Phosphatase 1 186 IPR016965 GO:0016791
Cca11g00301 223 TIGRFAM DKMTPPase-SF: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 1 150 IPR006384 GO:0016791
Cca11g00301 223 TIGRFAM HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 6 138 - -
Cca11g00301 223 PANTHER INORGANIC PYROPHOSPHATASE 1 221 - -
Cca11g00301 223 Gene3D - 2 140 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00301 Cca-Chr11 3818943 3821257 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00301 K13248 - gmx:100785878 412.149