Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00294 ATGACGGCCTTCTTTGATGATGCGTGTCACGCAGACTTCAAACAAGAACAGGATATGGAGATTGAAGCATTAGAAGCTATACTTATGGAGGACTTCAAAGAAATACACTCTGGTGAAAGTGGCCTAAGTACTTCCAATCGGTGCTTCCAAATAAAGGTTGTTGCGCAGGATGACGACGTAGATGGGCCAATAACTAATCCAGCTCAACTGGCTTTGATCTTTTCACACACAGAAAAATATCCCGATGAACCTCCACTTTTAAATTTGAAAAGTTTGCAAGGACTATCAACCGAAGATCTAAGGATTTTGAAAGAAAAACTTCAACAAGAGGCATCTGAAAATCTTGGTATGGCTATGATCTATACACTTGTTACCTCAGCTAAAGAGTGGTTGGCTGACCGGTTTTGTGAAGATTCTGCTGCTGAGATTATTGAAGCAGAAGAAGCAGCCAAAGATGATATAGTGATACCCCACGGGGAACCAGTTACTGTTGAAACATTTTTGGCATGGAGAGAGAGGTTTGAAGCTGAACTAGCATTGGAACGTGCCAAGCTAATGCCAGAGGCTGCGCTCGCAGCTCCCAAGGAAAAGAAGCTCTCTGGTAGACAGTGGTTTGAAACTATTTTTGTACATTCACAGAAAGGTGCAGCTGCGGTTGCGGAGGAATCtgacgaggaggatgaggaagatattgattttgatgaagatgatTTTGAAGATGATGATGAAGAGGATATGCTTGAGCATTATCTGGCTGAAAAAACTGATTCATCCACACATTCTTCGAGGAGAGCAAGTTAA 801 0.402 MTAFFDDACHADFKQEQDMEIEALEAILMEDFKEIHSGESGLSTSNRCFQIKVVAQDDDVDGPITNPAQLALIFSHTEKYPDEPPLLNLKSLQGLSTEDLRILKEKLQQEASENLGMAMIYTLVTSAKEWLADRFCEDSAAEIIEAEEAAKDDIVIPHGEPVTVETFLAWRERFEAELALERAKLMPEAALAAPKEKKLSGRQWFETIFVHSQKGAAAVAEESDEEDEEDIDFDEDDFEDDDEEDMLEHYLAEKTDSSTHSSRRAS 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00294 266 MobiDBLite consensus disorder prediction 216 266 - -
Cca11g00294 266 MobiDBLite consensus disorder prediction 221 247 - -
Cca11g00294 266 PANTHER RWD DOMAIN-CONTAINING PROTEIN 1-RELATED 9 258 - -
Cca11g00294 266 ProSiteProfiles RWD domain profile. 19 134 IPR006575 GO:0005515
Cca11g00294 266 MobiDBLite consensus disorder prediction 248 266 - -
Cca11g00294 266 SUPERFAMILY UBC-like 11 133 IPR016135 -
Cca11g00294 266 Pfam RWD domain 15 131 IPR006575 GO:0005515
Cca11g00294 266 SMART RWD2001b 19 134 IPR006575 GO:0005515
Cca11g00294 266 PANTHER RWD DOMAIN-CONTAINING PROTEIN 9 258 IPR040213 -
Cca11g00294 266 Gene3D Ubiquitin Conjugating Enzyme 7 137 IPR016135 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00294 - - gmx:100788547 365.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00294 11 3674304 3681547 Cca11g00294 11 3674304 3681547 ECH