Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00290 ATGAACGAGCATGGAAATGAAGAACCTGTTTTTGAATTTGGGGTGGTGATTCCGAGGAGAGTGGTGCAGGAAAAAGATGAATCTTGGGACTGTGCATCTGTCCTTGTAAAGGAGTTTGAGAAGATGGGGTTTATTGTTGAGAGAGTTGTTGGCATTGCAGATGAGTTCATCAAGTTGGCTGCACCTTTGGAGACACTTGGGAGGGCTGCAGCTGAACTACAGATCAAAAAACGGACTCTTATTGGTATGGATTTGCAATTTGAGGTGGAGGAGGTGGAAGCTTTTGTGAAACAACCTGATGGTTCTGTTTTCAGTTGGTGTGAGCGTTTTCAGTGCTACTGTCACTTGATATATGGAATAGTAAACAACAGCAAGTCAGCCAAAACCCTTAAATTTGATGGAAAAGAAATCCATTGGGAAATTGGAGAGAATCTTCTTCAGAAATTGGAATCAGAGAACATTGTTAAGCAAGTCTTTCCTTTGCATGATGAAAAGAAGAGAAAGAAACTTCTCAGAAGTTGGGCACTTCATTGGTGGGACTTAACTAATCAGCCAATTGATGAGATTTATTCTTACTATGGGGCAAAGATTGCAATCTATTTTGCTTTTCTTGGAATGTTCACAAGGTGGCTGCTCTTCCCTGCTGCATGTGGGCTTACATTGCAATTGATAGATTTTGGGTCATTGAGATTAGTGGTGCTTCCTGCTTTCTTCATCATAGTGATACTTTGGGCAATAATGTTTTCTCAGTTCTGGAAACGTAAAAATTCTGCACTGTTAGCAAGATGGCCTATTAGTTCTGCAGTTGCAGCTGACCAAGGATACAAGATTCTAGGCAGGAAGGCCAGCTCATGGCAGCCCCCAATGGAACTCTTGAAAGTATTTGAGTCTGATAGAGCTAAAGAGAAGGAAATATTTCATAGACATGAGTGGCTTGGGCGTCTCATGCGATTCAGAAATGATGCTATAATTATCTTTGGCATCATATGCCTCCAGTTACCATTTGAGTTGGCATATGCCCATCTTTATGAAGTTCTTGGTTCTGATTTAATTAAGTTTGGGCTCACTGCTGTTTACCTTTTCGCCATTCAGTATATTACCAAGATTGGTGGCAAGGTGTCTGTAAAACTTATCATGAATGAAAACAACGAAAACACAGAAAAAAGGGCTGACAGCTTGGTCTACAAGGTGTTTGGCCTGTACTTCATGCAGACATACATTGGAATCTTTTATCATGCCCTGTTGCATCGTAATTTTTCAACTCTTCGCCAAGTGTTGATTCAGCGGCTCCTTCTGTCTGAGGTGTTGGAAAACTTGTTGGAAAATTCATTGCCATATCTCAAGTATAGCTATAAAAAGTACAGGGTTCGACACAAAAAGAATGAGAAAGGAGAAGCAAGAGAAAAATTCCAGTTTACTTCTAGAGTAGAGAAAGAATACCTTAAGCCCTCTTACTCTGCTAGTATTGGTGAGGAACTTGAAGATGGATTATTTGATGATTTCTTAGAATTGGCATTGCAGTTTGGAATGATTATGATGTTTGCTTGCGCATTCCCACCTGCATTTGCTTTTGCTGCTGTGAACAATGTTATGGAAATCAGGACAGATGCATTGAAGCTGCTAGCAATTTTGAGGCGGCCTGTTCCTCGTGCAGCTGCAACGGTAGGAGCCTGGCTTAACATATTTCAGTTTCTTATATTGATGTCTATATGCACAAACTGTGCTCTTTTAGTATGGCTATATGATGAGGAGGGGAAATGGAAAATAGAGCCTGGACTAGCAGCAATTCTAATCATGGAGCATGTCCTCTTGTTGATTAAGTTTGGTTTCTCTCGCTTTGTTCCTGAGGAACCTGCTTGGGTAAGAGCCAACCGTGTAAAACACACTACACAGGCACAGGATATATGTTCTAAGAAGCTTTTAAGGTCCATTTCAGGCGGAGAGAAGACTCTTATGGAGGAGAAAAAATTGGAATAA 1977 0.4077 MNEHGNEEPVFEFGVVIPRRVVQEKDESWDCASVLVKEFEKMGFIVERVVGIADEFIKLAAPLETLGRAAAELQIKKRTLIGMDLQFEVEEVEAFVKQPDGSVFSWCERFQCYCHLIYGIVNNSKSAKTLKFDGKEIHWEIGENLLQKLESENIVKQVFPLHDEKKRKKLLRSWALHWWDLTNQPIDEIYSYYGAKIAIYFAFLGMFTRWLLFPAACGLTLQLIDFGSLRLVVLPAFFIIVILWAIMFSQFWKRKNSALLARWPISSAVAADQGYKILGRKASSWQPPMELLKVFESDRAKEKEIFHRHEWLGRLMRFRNDAIIIFGIICLQLPFELAYAHLYEVLGSDLIKFGLTAVYLFAIQYITKIGGKVSVKLIMNENNENTEKRADSLVYKVFGLYFMQTYIGIFYHALLHRNFSTLRQVLIQRLLLSEVLENLLENSLPYLKYSYKKYRVRHKKNEKGEAREKFQFTSRVEKEYLKPSYSASIGEELEDGLFDDFLELALQFGMIMMFACAFPPAFAFAAVNNVMEIRTDALKLLAILRRPVPRAAATVGAWLNIFQFLILMSICTNCALLVWLYDEEGKWKIEPGLAAILIMEHVLLLIKFGFSRFVPEEPAWVRANRVKHTTQAQDICSKKLLRSISGGEKTLMEEKKLE 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00290 658 PANTHER BNAC06G23840D PROTEIN 3 646 - -
Cca11g00290 658 PANTHER NGEP-RELATED 3 646 IPR007632 -
Cca11g00290 658 Pfam Calcium-activated chloride channel 189 627 IPR007632 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00290 Cca-Chr11 3643565 3650177 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00290 K19327 - gmx:100817965 1183.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00290 11 3643565 3650177 Cca11g00290 11 3643565 3650177 ECH