Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00287 ATGCAGTCTAGGTTGGAGGAAGGGAAGGACCCTGCTGCGTTGAGAACTACTCCTTCTAGGCCCTTCCCTTTGAGACTTCTTCAGTTCTTTGTGCTCTTTTTGGTTATTGGTATTGGTGCTTCGCTTCTTAGCATGTACATGATTAGGCATTTTGGTATTCATAATGTGGGTTTGGTACAGTCTGCGTTTAAGCCTTGCTTTGAGCAGCCGGTAACCATAGAAAGTTGGATTAGGCCTCCATCCAGTTTGAGGCATGCCATGAATGACACTGAACTCTTCTGGCGTGCTTCTTTTGTTCCAAGGACAAATGGTTATCCTTTTAAAAGAACTCCCAAGATTGCCTTCATGTTCTTGACCAAGGGACCCTTGCCAATGGCACCACTATGGGAGAAGTTCTTCAAAGGGCATGAGAAGCTTTATTCTATTTATGTTCATTCGCTGCCGTCTTATAATGCTGACTTTCCACCATCATCAGTTTTTTACAGGAGACAAATTCCAAGCCAGGTGGCAGAGTGGGGAATGATGAGTATGTGCGATGCTGAAAGAAGACTTCTGGCTAATGCATTGCTTGATATCTCAAATGAATGGTTTATCCTCCTATCGGAGTCCTGCATTCCTCTCCAGAACTTCAGTATTGTATACCGTTACATATCACGCTCGAGATATAGCTTTATGGGTGCATTTGATGAACCTGGTCCTTATGGGAGAGGACGATATGATGAAAACATGGCACCCGAGATCAACATGAGTGACTGGCGTAAGGGGTCTCAGTGGTTTGAAATTAGCCGAGAACTAGCTGTTAGGATAGTTGAAGACAGCACTTACTATCCTAAGCTCAAAGAATTCTGCATACCACACAAATGCTATGTGGATGAGCACTATTTCCAGACAATGTTGACAATTAATACACCTCATCTTTTGGCAAACAGAAGCCTCACTTATGTGGATTGGTCAAGGGGTGGTGCTCATCCAGCTACCTTTGGGAAGAATGACATCAAAGAGGAATTCTTCAAGAAAATTTTGCAAGAGCAGACATGTCTTTACAATAACCAGCCAACTTCCCTTTGCTTCTTATTTGCAAGAAAATTTGCACCTAATGCTTTGGACCCTCTTTTAGACATAGCTCCCAAAGCTCTAGGAATTTGA 1146 0.4302 MQSRLEEGKDPAALRTTPSRPFPLRLLQFFVLFLVIGIGASLLSMYMIRHFGIHNVGLVQSAFKPCFEQPVTIESWIRPPSSLRHAMNDTELFWRASFVPRTNGYPFKRTPKIAFMFLTKGPLPMAPLWEKFFKGHEKLYSIYVHSLPSYNADFPPSSVFYRRQIPSQVAEWGMMSMCDAERRLLANALLDISNEWFILLSESCIPLQNFSIVYRYISRSRYSFMGAFDEPGPYGRGRYDENMAPEINMSDWRKGSQWFEISRELAVRIVEDSTYYPKLKEFCIPHKCYVDEHYFQTMLTINTPHLLANRSLTYVDWSRGGAHPATFGKNDIKEEFFKKILQEQTCLYNNQPTSLCFLFARKFAPNALDPLLDIAPKALGI 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00287 381 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 4 379 IPR044174 GO:0016757
Cca11g00287 381 Pfam Core-2/I-Branching enzyme 113 340 IPR003406 GO:0016020|GO:0016757
Cca11g00287 381 PANTHER - 4 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00287 Cca-Chr11 3596805 3602991 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00287 - - gmx:100793448 710.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00287 11 3596805 3602991 Cca11g00287 11 3596805 3602991 ECH