Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00281 ATGGCTAGTATTCTGGGTCCTTCTTTAACCATACTTACTTCTTATGCATTCAGGAATCAAACAAAACTTGTGACTCATTCCCCATTATGGATTTCTTGCACTCGCCCTGAAAATAGAAACCATTTTCTGCTCAAATCCTCAAATGGGCTTCCGTTAAATGCTCTTTCTTCTAATGATGTAGGTTTAGCTGCAAGTTCATTGGCCAAAGAAGATATCAAGCCCCAATCACTCGAAGGATTATTTCCCTTGTCAGACTCAGAATCCAAAGGATCCAACCTTACTATAACTGTTGTTGGAGCTTCTGGAGACCTTGCTAAAAAGAAGATTTTTCCGGCACTCTTTGCTCTTTTTTACGAAGATTGGCTACCTGAGAATTTTCTCGTGTTTGGATTTGCTCGGACTAAAATGACCAATGAGGAATTAAGGAATATGATTAGCAAAACTTTAACATGCAGAATTGATAAGAGGGAAAATTGCGAAGATAAAATGGATCAGTTCTTAAAAAGATGCTTTTACCATTCTGGCCAATACAATTCTGAGGAACACTTCTTAGAACTGGATAGCAAGCTGAGAGAGAAAGAGGGTGGAAAATTATCAAACAGATTGTTTTATTTGTCAATACCTCCAAATATATTTGTTGATGTGGTGAGATGCGCTAGCCTTAAAGCTTCTTCAAAAGATGGATGGACAAGGGTTATTGTTGAAAAGCCATTTGGTCGAGACTCAGAATCATCTAGTGAGCTAACAAAATGTTTGAAGCAGTACCTCACTGAAGACCAAATATTCAGGATTGACCATTACTTGGGCAAGGAGCTCGTGGAGAATCTCTCAGTGCTTCGCTTTTCAAATCTTGTTTTCGAGCCTCTATGGTCCCGGAATTACATTCGCAATGTGCAGCTAATATTTTCTGAAGATTTTGGAACAGAGGGAAGAGGGGGTTATTTTGATAACTACGGAATCATCCGTGATATAATGCAAAATCATCTTCTGCAAATATTAGCATTGTTTGCAATGGAAACACCTGTCAGCTTGGCTGCTGAGGACATCAGAAATGAGAAGGTGAAGGTTCTGAGATCAATGAGACCACTGCAGCTTGAAAATGTTGTTGTTGGTCAGTATAAGGGCCACAGCAAGGGTGGTAAATCATATCCTGGTTATACAGATGATCCAACTGTTCCAAAGGGTAGTCTTACCCCAACATTTGCAGCAGCAGCTCTTTTTATTGACAATGCCAGATGGGATGGGGTTCCTTTTCTCATGAAAGCTGGCAAGGCTCTCCATACTAAACGTGCAGAAATCAGAGTACAATTCAGACATGTCCCAGGCAACTTGTACAAGAGGAACTTTGGAACCGATCTGGACAAGGCTACAAATGAGCTTGTGCTTCGTGTACAACCTGATGAAGCTATATATTTGAAGATCAACAATAAAGTTCCTGGTCTGGGAATGAGATTAGACAGAAGTGACCTAAATTTGCTTTTCCGAGCAAGGTATCCAAGAGAGATTCCAGATGCATATGAGAGGTTACTCTTAGATGCTATTGAAGGCGAGCGAAGGCTGTTCATTAGAAGTGATGAGCTTGATGCAGCTTGGGCACTATTCACCCCTCTGCTAAAAGAAATTGAAAACAAGAGGATTGCTCCAGAGCTCTACCCCTATGGTAGCAGAGGACCAGTTGGAGCACATTACCTTGCTGCAAGACACAATGTAAGATGGGGAGATCTCGGTAACGAAGACTCATAA 1743 0.4091 MASILGPSLTILTSYAFRNQTKLVTHSPLWISCTRPENRNHFLLKSSNGLPLNALSSNDVGLAASSLAKEDIKPQSLEGLFPLSDSESKGSNLTITVVGASGDLAKKKIFPALFALFYEDWLPENFLVFGFARTKMTNEELRNMISKTLTCRIDKRENCEDKMDQFLKRCFYHSGQYNSEEHFLELDSKLREKEGGKLSNRLFYLSIPPNIFVDVVRCASLKASSKDGWTRVIVEKPFGRDSESSSELTKCLKQYLTEDQIFRIDHYLGKELVENLSVLRFSNLVFEPLWSRNYIRNVQLIFSEDFGTEGRGGYFDNYGIIRDIMQNHLLQILALFAMETPVSLAAEDIRNEKVKVLRSMRPLQLENVVVGQYKGHSKGGKSYPGYTDDPTVPKGSLTPTFAAAALFIDNARWDGVPFLMKAGKALHTKRAEIRVQFRHVPGNLYKRNFGTDLDKATNELVLRVQPDEAIYLKINNKVPGLGMRLDRSDLNLLFRARYPREIPDAYERLLLDAIEGERRLFIRSDELDAAWALFTPLLKEIENKRIAPELYPYGSRGPVGAHYLAARHNVRWGDLGNEDS 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00281 580 Gene3D - 89 263 - -
Cca11g00281 580 PANTHER GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE 2, CHLOROPLASTIC 82 578 - -
Cca11g00281 580 PIRSF G6PD 82 576 IPR001282 GO:0006006|GO:0016614|GO:0050661
Cca11g00281 580 Hamap Glucose-6-phosphate 1-dehydrogenase [zwf]. 92 574 IPR001282 GO:0006006|GO:0016614|GO:0050661
Cca11g00281 580 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 265 572 - -
Cca11g00281 580 ProSitePatterns Glucose-6-phosphate dehydrogenase active site. 265 271 IPR019796 GO:0004345|GO:0006006
Cca11g00281 580 PRINTS Glucose-6-phosphate dehydrogenase signature 231 244 IPR001282 GO:0006006|GO:0016614|GO:0050661
Cca11g00281 580 PRINTS Glucose-6-phosphate dehydrogenase signature 255 283 IPR001282 GO:0006006|GO:0016614|GO:0050661
Cca11g00281 580 PRINTS Glucose-6-phosphate dehydrogenase signature 307 324 IPR001282 GO:0006006|GO:0016614|GO:0050661
Cca11g00281 580 PRINTS Glucose-6-phosphate dehydrogenase signature 325 341 IPR001282 GO:0006006|GO:0016614|GO:0050661
Cca11g00281 580 PRINTS Glucose-6-phosphate dehydrogenase signature 412 438 IPR001282 GO:0006006|GO:0016614|GO:0050661
Cca11g00281 580 TIGRFAM zwf: glucose-6-phosphate dehydrogenase 92 573 IPR001282 GO:0006006|GO:0016614|GO:0050661
Cca11g00281 580 PANTHER GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE G6PD 82 578 IPR001282 GO:0006006|GO:0016614|GO:0050661
Cca11g00281 580 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 90 278 IPR036291 -
Cca11g00281 580 Pfam Glucose-6-phosphate dehydrogenase, C-terminal domain 278 572 IPR022675 GO:0004345|GO:0006006|GO:0050661
Cca11g00281 580 Gene3D Dihydrodipicolinate Reductase; domain 2 264 573 - -
Cca11g00281 580 Pfam Glucose-6-phosphate dehydrogenase, NAD binding domain 97 275 IPR022674 GO:0006006|GO:0016614|GO:0050661
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00281 Cca-Chr11 3508244 3512861 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00281 K00036 - gmx:100801945 1076.62