Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00278 ATGAAAAGCAAGATTTTCAGTGAAGGACTTGTGAACTCCCAATTCTCAGGGGATGAAGTAGAGGCAAAGACAGCACCAATAGATGAGAGGGAACTGGTGTTGGATGGTGGATTTGTGATACCACAGACCAACTCATTTGGGCACATGTTTAGGGCTTATGATGCTGAAAGTGAAAGACAACAAGGAGTGGAGAACTTCTACAGAAAAAACCACACTTACCAATCAGTTGATTTTGTGAAGAAAATGAGAGACGAGTATGCAAAATTGAACAGAGTAGAGATGAGCATATGGGAATGTTGTGAACTCCTTAATGAAGTGGTGGATGAAAGTGACCCTGACTTGGAAGAACCTCAAATTGAGCACTTGCTCCAAACAGCTGAAGCTATAAGGAGGGACTACCCTAACGAAGATTGGTTGCACTTAACTGGCCTTATTCATGATCTTGGCAAGGTGATAAACTTACCTAGTTTTGGAGGACTTCCTCAATGGGCTGTTGTAGGGGACACATTCCCAGTTGGTTGTAGATTTGATGAATCCATTGTTCACCACAAGTATTTTAAGGAAAATCCAGACTACAACAATCCATCATACAACACTAAATATGGGATTTATTCCGAGAAATGTGGACTTGACAATGTGATGATGTCATGGGGACATGATGACTACATGTATCTAGTGGCAAAGAAGAATAATACTACACTGCCCTCTGCTGCTTTGTTCATCATAAGATACCATTCATTCTATGCATTACACAGGGAAGGAGCCTATAAGCACTTGATGAATGATGAGGATGTTGAGAATCTGAAATGGCTCCATATTTTCAACAAATATGACCTTTACAGCAAGAGCAACGTTCGAATTGATGCTGAAAGGGTCAAACCATACTATCTCTCCCTCATTGAAAAGTACTTCCCTGCAAAGCTGAAGTGGTGA 933 0.4084 MKSKIFSEGLVNSQFSGDEVEAKTAPIDERELVLDGGFVIPQTNSFGHMFRAYDAESERQQGVENFYRKNHTYQSVDFVKKMRDEYAKLNRVEMSIWECCELLNEVVDESDPDLEEPQIEHLLQTAEAIRRDYPNEDWLHLTGLIHDLGKVINLPSFGGLPQWAVVGDTFPVGCRFDESIVHHKYFKENPDYNNPSYNTKYGIYSEKCGLDNVMMSWGHDDYMYLVAKKNNTTLPSAALFIIRYHSFYALHREGAYKHLMNDEDVENLKWLHIFNKYDLYSKSNVRIDAERVKPYYLSLIEKYFPAKLKW 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00278 310 Pfam Myo-inositol oxygenase 61 310 IPR007828 GO:0005506|GO:0005737|GO:0019310|GO:0050113
Cca11g00278 310 Gene3D Hypothetical protein af1432 92 272 - -
Cca11g00278 310 PANTHER MYOINOSITOL OXYGENASE 12 310 IPR007828 GO:0005506|GO:0005737|GO:0019310|GO:0050113
Cca11g00278 310 PANTHER INOSITOL OXYGENASE 1 12 310 - -
Cca11g00278 310 SUPERFAMILY HD-domain/PDEase-like 54 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00278 Cca-Chr11 3488776 3492769 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00278 K00469 - gmx:100809388 586.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00278 11 3488776 3492769 Cca11g00278 11 3488776 3492769 ECH