Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00270 ATGAATATGAAGGCAGTTGTTTTGGCTGTTGCTACAATTTTGGTAGCATCACAGTGCCATGGCTCAGAATACGAATTTTACCCTCTGGAATTGAGATCTGATGGCCTCACTGTCCACTACCCTCCAGAGGTATGGTGCCCAAGTTGGAGGCTTGCAGCGGAAGCACACAACTATATTAACTGGAAAACTGTTCCTCAAAAATGCGCAGAATACGTAGAAAGCTACATCCAAGGAGATCAATATGACTCAGACTCCAAATATGTTAACCAACAAGCTTATTTTTTTGCTAAATCCATCAAAAGGAATGAGAATGACGTTTTCATTTTCAGCGTAGATGGAACCGTACTGTCTAATGTCCCATATTATTCTAAACatggatatggGGTGAATCCATATAATGCGACTGTGTACGATGCATGGGTTCTGAAGGGTGAGGCACCGGCACTGGCACAGACTCTTAAAAATTACAACAATCTGTTGTCTCTTGGCTTCAAGATTGTGTTCCTAACAGGAAGAACAGTGGATAAGAAGGCTGTAACCGAAGCCAACTTGAAGGAGGCTGGTTTCCACACGTGGGAGAAGTTGATTCTCAAGGATCCAATTGCATACAATGGTCAGAACGCAGCTTCATACAAAGCAGCTGAGAGGAAGAAGCTGACTAAGGAGGGATGGAGAATCGTTGGTAACATTGGAGACCAGTGGAGTGATATAACCGGACGCAACGTTGGCCTCAGGACCTTTAAGTTGCCTAACCCAATGTACTTCATTGCTTGA 774 0.4315 MNMKAVVLAVATILVASQCHGSEYEFYPLELRSDGLTVHYPPEVWCPSWRLAAEAHNYINWKTVPQKCAEYVESYIQGDQYDSDSKYVNQQAYFFAKSIKRNENDVFIFSVDGTVLSNVPYYSKHGYGVNPYNATVYDAWVLKGEAPALAQTLKNYNNLLSLGFKIVFLTGRTVDKKAVTEANLKEAGFHTWEKLILKDPIAYNGQNAASYKAAERKKLTKEGWRIVGNIGDQWSDITGRNVGLRTFKLPNPMYFIA 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00270 257 PANTHER VEGETATIVE STORAGE PROTEIN 1-RELATED 6 256 - -
Cca11g00270 257 TIGRFAM plant-AP: plant acid phosphatase 45 257 IPR010028 GO:0003993
Cca11g00270 257 PIRSF VSP 1 257 IPR014403 -
Cca11g00270 257 Gene3D - 43 257 IPR023214 -
Cca11g00270 257 CDD HAD_VSP 72 256 - -
Cca11g00270 257 PANTHER ACID PHOSPHATASE-LIKE PROTEIN 6 256 - -
Cca11g00270 257 SUPERFAMILY HAD-like 97 254 IPR036412 -
Cca11g00270 257 Pfam HAD superfamily, subfamily IIIB (Acid phosphatase) 43 255 IPR005519 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00270 Cca-Chr11 3365041 3366471 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00270 - - gmx:547821 318.931