Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cca11g00268 | ATGAAGGTACTTGTTTTCTTAGTTGCTATAATTGTAGGAGCATGCCAGTGCCATGGCTCAGACCATGAGCATGGTGCAACCTTCCAAATTTTCCCTCTCAGAATGAAAACTGGGTCCGGTGGCCACTACATTCCGGAAGTGTCATGTGCAAGTTGGAGGCTTGGTGTGGAAGCACATAATGTCATTGATTGGAAAACTGTGCCTATTTCCTGTGAAGGATACATAGGGAACTATATTCTTGGTGACCAATATAGATCAGATTCCAAAACAGTTAACCAACAAGCTTATTTTTATGCCAAAACCCTTAATATCACTTCCAGAGACGTGTGGGTCTTCGACATAGATGAGACCTCACTTTCTAATCTCCCATATTATGCTGAACATGGATTTGGGGTGGAACCATACAACGCGACGGCGTTTAATCAATGGGTTGACCTTGGCACGGCACCAGCACTGCCTGAGACTCTGAAACTGTACAAGAAATTGTTATCTCTTGGAGTGAAGATTGTCTTCTTAACAGGAAGGCCACTCGATCAAACCACTGTCACTACTGCCAACTTAAAGCGTGCTGGATACCACACCTGGTTCAAGTTGATTCTCAAGGATACATCTATATACCATGGTAAGACAGCAGTTACATACAAATCAAGTGAGAGAAAGAAGCTTGAAGAAAAGGGATACAATATCATTGGAAACATTGGAGACCAATGGAGCGATATCCTGGGAACCAACACAGGGGATAGAACCTTTAAGCTTCCTGATCCCATGTACTACATTAGTTGA | 783 | 0.4291 | MKVLVFLVAIIVGACQCHGSDHEHGATFQIFPLRMKTGSGGHYIPEVSCASWRLGVEAHNVIDWKTVPISCEGYIGNYILGDQYRSDSKTVNQQAYFYAKTLNITSRDVWVFDIDETSLSNLPYYAEHGFGVEPYNATAFNQWVDLGTAPALPETLKLYKKLLSLGVKIVFLTGRPLDQTTVTTANLKRAGYHTWFKLILKDTSIYHGKTAVTYKSSERKKLEEKGYNIIGNIGDQWSDILGTNTGDRTFKLPDPMYYIS | 260 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cca11g00268 | 260 | ProSiteProfiles | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 15 | - | - | |
| Cca11g00268 | 260 | PANTHER | ACID PHOSPHATASE-LIKE PROTEIN | 4 | 259 | - | - | |
| Cca11g00268 | 260 | PIRSF | VSP | 1 | 260 | IPR014403 | - | |
| Cca11g00268 | 260 | TIGRFAM | plant-AP: plant acid phosphatase | 46 | 259 | IPR010028 | GO:0003993 | |
| Cca11g00268 | 260 | CDD | HAD_VSP | 77 | 259 | - | - | |
| Cca11g00268 | 260 | Gene3D | - | 44 | 260 | IPR023214 | - | |
| Cca11g00268 | 260 | PANTHER | VEGETATIVE STORAGE PROTEIN 1-RELATED | 4 | 259 | - | - | |
| Cca11g00268 | 260 | SUPERFAMILY | HAD-like | 101 | 257 | IPR036412 | - | |
| Cca11g00268 | 260 | Pfam | HAD superfamily, subfamily IIIB (Acid phosphatase) | 41 | 259 | IPR005519 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Cca11g00268 | Cca-Chr11 | 3339476 | 3343215 | Dispersed/Tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cca11g00268 | - | - | gmx:547669 | 461.07 |