Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00256 ATGAATAAGTTAGGTTTAACTGAATCTCCATTCCCTACGCTCTCTTCTGATGAGATGCTGGAATTGGAAAACATCTACAAAGATATGGGAGAAAAACCACTAGATCGGATGCTCTGCCAGGAGATTGCTAAAAATTTTAGTTCCTCTTCAAACGGTGCTAGTAAAACTTCCTTATCATGGCAACAGGTGCAACAGTGGTTCAGAAATAGACAGAGAGTGACACAGGTTAAAGATAGCTCATCTCCCTGCCTGCTATCTCCTGATCATTCACATTCATTTCTTTTAGGAAGTGGAGATGGAAACTCTTCAAGTTCAAAAGATCTCTCAGAGTTGGCATTTGAAGCAAGATCTACTAAAGATGTTGCATGGCATGATGTTGCAATGTTCCTTAACTATAGAGTTCTGAGCACAGGCGAACTCGAGGCCCGTGTAAGATATGCTGGATTTGGCAAAGAGCAGGATGAGTGGATGAATGTGAGAGAGGGGGTGCGGGAGAGATCTGTTCCGTTAGAACCTTCAGAGTGTCACAAGGTGAAGGATGGGCATCTTGTACTATGTTTTCTGGAAAGAGAAGATTATGCCCTCTATTGTGATGCTCGAGTTGTAAAAGTCCAGAGGAAGATACATGATCCAGAAGACTGTACGTGCACATTCATTGTCCGATTTGTCCATGACAACACTGAGGAAGGAGTTTCTTGGAAGAGGTTATGCTGTAGGCCTACACAAGAGGAACCTGCGGTCTACACAAATCCTGCCCTTAATTTCACCCTAAATCCCACCTTAAATCCCATAGAATCCTTGTGGGGATAA 810 0.4309 MNKLGLTESPFPTLSSDEMLELENIYKDMGEKPLDRMLCQEIAKNFSSSSNGASKTSLSWQQVQQWFRNRQRVTQVKDSSSPCLLSPDHSHSFLLGSGDGNSSSSKDLSELAFEARSTKDVAWHDVAMFLNYRVLSTGELEARVRYAGFGKEQDEWMNVREGVRERSVPLEPSECHKVKDGHLVLCFLEREDYALYCDARVVKVQRKIHDPEDCTCTFIVRFVHDNTEEGVSWKRLCCRPTQEEPAVYTNPALNFTLNPTLNPIESLWG 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00256 269 Gene3D - 108 169 - -
Cca11g00256 269 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 1 1 243 - -
Cca11g00256 269 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 1 243 IPR039276 -
Cca11g00256 269 Pfam SAWADEE domain 110 237 IPR032001 GO:0003682
Cca11g00256 269 Gene3D - 170 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00256 Cca-Chr11 3101750 3111677 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00256 - - gmx:100800332 390.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00256 11 3101750 3111677 Cca11g00256 11 3101750 3111677 ECH